Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2222 ATGGCTAACAAGCCTCGTTCTAATTCGTCTTTCCTCTTTCTATTGCTTATCCTACATTTTAACATGGGGAAAAGCCAGCTCCAGCTGAACTACTACTCCACCAGCTGCCCAAGAGCCGAAGAGATAATCAAGCAGCAAGTCACTGAACTATATAATCAAGGAAGCACAGCCATTTCGTGGCTTCGAAATCTCTTCCATGATTGCATGGTCAATTCATGCGATGCATCCTTTCTTTTAGCAACGTGGCGCGGTGTGGTATCGGAGCAGACATCGGTAAGAAGTTTTGGGATGAGAAATTTCAAGTATGTGAACACCATCAAAGCTGCTGTTGAGAAAGAATGTCCCTTGACAGTGTCATGTGCTGATATTGTTGCTCTTTCTGCTAGAGACGGTATTGCAATGTTGGGAATTCCAAACATTGAAATGAAGAGTGGAAGAAGGGATAGCAAAGAAAGCTATGTAACGGTGGTGGAAGAATCCATTCCAAGCCATAATGCCTCCATGTCCTTAGTGCTCACTCGTTTCCAAGCTATTGGTGTTGATGTTGAAGCCACGGTTGCTCTTTTAGGAGCACATTCAGTGGGAAGAGTACACTGCATAAATATGGTCCACAGACTATACCCTATAGTGGACCCAACGCTAGACCCTACATATGTTGTCTACCTAAAACGTAGATGTCCAAAACCAAACCCAAAGGCAAAAGCTGTCCAATATGTAAGGAATGATCTAAAAACTCCATTGATAATTGACAACAACTACTACAAGAACATTTTGCAACATAAGGGTCTTCTAACTGTGGATGAAGAACTAGCCACTGACCCAATAACATCACCTTATGTACAAAAAATGGCAGATGATAATGGTTACTTCAATGACCAATTCTCAAGGGCTGTTCTTTTGTTATCAGAGAATAATCCTCTTATTGGAGATCAAGGTGAAATCAGAAAGGATTGTCGCTTCGTTAATGCCAATTAG 975 0.4164 MANKPRSNSSFLFLLLILHFNMGKSQLQLNYYSTSCPRAEEIIKQQVTELYNQGSTAISWLRNLFHDCMVNSCDASFLLATWRGVVSEQTSVRSFGMRNFKYVNTIKAAVEKECPLTVSCADIVALSARDGIAMLGIPNIEMKSGRRDSKESYVTVVEESIPSHNASMSLVLTRFQAIGVDVEATVALLGAHSVGRVHCINMVHRLYPIVDPTLDPTYVVYLKRRCPKPNPKAKAVQYVRNDLKTPLIIDNNYYKNILQHKGLLTVDEELATDPITSPYVQKMADDNGYFNDQFSRAVLLLSENNPLIGDQGEIRKDCRFVNAN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2222 324 Gene3D - 30 322 - -
Mtr1g2222 324 Gene3D Peroxidase, domain 2 162 301 - -
Mtr1g2222 324 PANTHER PEROXIDASE 21 14 321 - -
Mtr1g2222 324 ProSiteProfiles Plant heme peroxidase family profile. 26 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PANTHER PEROXIDASE 25-RELATED 14 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2222 324 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2222 Mtr-Chr1 32580949 32584646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2222 29 322 Peroxidase AT2G37130 70.608 1.77e-159 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2222 K00430 - gmx:100811277 512.686