Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2218 ATGGCTTACAAGTCTAGTTCTAATTCCTCTTTCCTCTTTCTATTGCTTCTCCTACATTTTAATTTGGGGATAAGCCAACTACAGGTAAACTACTACTCCAAGAGCTGCCCAAAAGCAGAAGAGATCATCAAGCAACAAGTCAATGAATTGTATAACAAGCATGGAAACACAGCAATTTCGTGGGTTAGAAATCTCTTCCATGATTGCATAGTCAAGTCATGTGATGCATCCCTGCTTTTGGAGACGGTGCACGGCGTGGTATCGGAGCAGACAGCGGAGAGAAGTTTTGGGATGAGAAACTTCAAGTATGTGAGCACCATCAAAGCTGCTCTTGAAAAAGAATGTCCTTTGACAGTGTCATGCGCTGACATTGTTGCTCTTTCTGCTAGAGACGGTATTGCCAGGTTGGGAGGTCCAAACTTTGAAATGAAGAGTGGACGAAAGGATAGCAAAGAAAGCTATGTAAAGGTGGTGGAACAATTCATTCCAAATCATAATGACTCAATATCCTCAGTGCTTTCTAGTTTTCAAGCCATTGGCATTGACGTTGAAGCCACGGTTGCTCTTTTAGGAGCACACTCGGTTGGAAGAGTACATTGCATGAATTTGGTCCACAGACTATACCCCACAGTGGATCCAACGTTAGATCCTACACATGCTGCCTACCTAAAACGTAGGTGCCCAACACCAAATCCAGATCCAAAAGCTGTCCAATATGTGAGGAATGATCTAAAAACACCAATGATAATTGACAACAACTACTACAAAAACATCTTGCAACATAAGGGTCTTCTAACAGTGGATGAAGAACTAGCTACTGATCCAAGAACATCACCTTATGTGAAAAAAATGGCAGCTGATAATGGATACTTCAATGAACAATTCTCAAGGGCTGTTCAATTGTTATCAGAGAATAATCCTCTTATTGGAGATCAAGGTGAAATTAGAAAGGATTGCCGTTACGTTAATGCCAATTAG 978 0.4121 MAYKSSSNSSFLFLLLLLHFNLGISQLQVNYYSKSCPKAEEIIKQQVNELYNKHGNTAISWVRNLFHDCIVKSCDASLLLETVHGVVSEQTAERSFGMRNFKYVSTIKAALEKECPLTVSCADIVALSARDGIARLGGPNFEMKSGRKDSKESYVKVVEQFIPNHNDSISSVLSSFQAIGIDVEATVALLGAHSVGRVHCMNLVHRLYPTVDPTLDPTHAAYLKRRCPTPNPDPKAVQYVRNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTSPYVKKMAADNGYFNEQFSRAVQLLSENNPLIGDQGEIRKDCRYVNAN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2218 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 SUPERFAMILY Heme-dependent peroxidases 26 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 Gene3D Peroxidase, domain 2 163 302 - -
Mtr1g2218 325 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Mtr1g2218 325 Gene3D - 30 323 - -
Mtr1g2218 325 Pfam Peroxidase 44 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PANTHER PEROXIDASE 21 14 322 - -
Mtr1g2218 325 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g2218 325 PANTHER PEROXIDASE 25-RELATED 14 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2218 Mtr-Chr1 32531129 32534189 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2218 29 323 Peroxidase AT2G37130 76.351 7.59e-177 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2218 K00430 - gmx:100785485 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2218 1 32531129 32534189 Mtr1g2218 1 32531129 32534189 ECH