Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2205 ATGAAATTCTCACTTTTCGCTTGTTTCTCATCATGGGATACTGAAAATAACAACATCAACAACGATTATGCTGAGGGAGATATTAATGATGGAAGTTTTCGTGTATTCACTTATAACCAATTGAAATCTGCTACTAATAATTTTGATCACAAAATTGGTCAAGGTGGATTTGGCTCTGTTTATAAGGGGAGGCTCATGGATGGATCATTTGTGGCAGTGAAAGTGCTTTCTGTTGAGACTGAATCTATGAGAGGAGAGAGGGAATTTGTTGCAGAATTGGCTGCACTATCAAATATAAAGCACCAAAATCTTGTTGGTTTTAAAGGGTGTTGTGTTGAAGGAGCAAAAAGATATTTAGTCTATGATTATATGGAGAATAATAGCCTCCATCACACTTTCTTAGGTTCTGAGGAGAGAAGGATGAGGTTCAGTTGGGAATCAAGGAGGAATATATCTATTGGCGTGGCTCGTGCAATATCCTATCTTCATGAGGAGTTGAAGCCTCATATAGTACATAGAGATATCAAAGCCAAAAATATACTAATTGACAGAAATTTCACACCAAAAGTTGCAGATTTTGGTTTGGCCAAATTAATGAGAGATGAAACATCTTACATTAGTACTAAAGTTGCAGGAACATTGGGTTATTTGGCTCCAGAGTATGCTAGTTCTGGACAACTAAGAAGAAAATCAGATGTTTATAGCTTTGGAGTATTGCTTTTACAAATTATCACTGGCTTGGCTGTGGTAGATGCTTATACAGACATTGAACGTTTCATTGTAGAAAAGGCTTGGGCAGCTTATGAGGCTAATGATCTATTAAGAATAGTTGATCCAGTGCTTAATAAAAACTATTCAGTGGAAGAAGCCATAAAATTCCTCAAAGTGGGGTTACTTTGCGTGCAAGAAACAGCAAGACTTAGGCCAAAAATGTCGGAGGTTGTAGAAATGTTGACCAACAACAATGTTGATCATATGAAAGAGGTTAAGATTTCAAAACCAGGTTTTGTTGCTGACCTCAGAAACATTAGAATAAAACAACACAAGATAACTGACTCCCCACAATCTGGTTCTTCTCCAGGAGCATCCTTTGCAAGCTCCATCTGGAGTATGGGAAATCTCGCCCGTTGA 1131 0.3767 MKFSLFACFSSWDTENNNINNDYAEGDINDGSFRVFTYNQLKSATNNFDHKIGQGGFGSVYKGRLMDGSFVAVKVLSVETESMRGEREFVAELAALSNIKHQNLVGFKGCCVEGAKRYLVYDYMENNSLHHTFLGSEERRMRFSWESRRNISIGVARAISYLHEELKPHIVHRDIKAKNILIDRNFTPKVADFGLAKLMRDETSYISTKVAGTLGYLAPEYASSGQLRRKSDVYSFGVLLLQIITGLAVVDAYTDIERFIVEKAWAAYEANDLLRIVDPVLNKNYSVEEAIKFLKVGLLCVQETARLRPKMSEVVEMLTNNNVDHMKEVKISKPGFVADLRNIRIKQHKITDSPQSGSSPGASFASSIWSMGNLAR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2205 376 SUPERFAMILY Protein kinase-like (PK-like) 30 319 IPR011009 -
Mtr1g2205 376 PANTHER RECEPTOR-LIKE KINASE 8 335 - -
Mtr1g2205 376 CDD STKc_IRAK 52 320 - -
Mtr1g2205 376 Pfam Protein kinase domain 49 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2205 376 Gene3D Phosphorylase Kinase; domain 1 18 123 - -
Mtr1g2205 376 ProSiteProfiles Protein kinase domain profile. 46 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2205 376 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Mtr1g2205 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mtr1g2205 376 Gene3D Transferase(Phosphotransferase) domain 1 124 338 - -
Mtr1g2205 376 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 335 - -
Mtr1g2205 376 SMART serkin_6 46 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2205 Mtr-Chr1 32359953 32363253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2205 27 318 Receptor kinase-like Gene Family AT1G53430 49.662 2.01e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g2205 Pkinase 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2205 - - gmx:100813945 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2205 1 32359953 32363253 Mtr1g2205 1 32359953 32363253 ECH