Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2203 ATGCATATTCCATTTAAACCACTCTTATTCATTCTTTTCTTCTTTTTCTTTCATGGTACTAATTCTTTTGGAACCATGGGACCAATCTCTGCTTCATTCGGAGAATACGAGTTATTTTGTTCCATCGACGCAAGTGGAAAACAAGACGTTATTTGTTGGGGAAAAAACACAACTTCACCACAAACTCCTTCTTCTTCCTCGTATGTTAATAACATACCTGCCATGTCAGCACTTTCTGGTGGTGAAGGTTTTCTTTGCGGCATTTTAGCCAACACTTCCCAAGTTTTTTGTTGGGCTGCAACTTCTAAGCAAAACGCAGATCCCATTTTGGTTCCACCGGCATACAGGACCACCGCCTACTCTCACGTTGCAGCCGGGCAGAATCATGTCTGTGCTGTTAGAGGATCTTACTATTCGGATCGTGATTCAGGAACGGTGGATTGCTGGGAAATCGCGAAAAGAAGTAAGAATGGTACATTAATGGCGGTGATCAATGAGTCTTTTGACGATCAATCTGTTACTAATCTTGAAATGAACCGGGTTGTTTCCGGTGAAGGGTTTACTTGTGGTGAGGTTAGAGATGGAGGGTTGGTTTGTTGGGGGCCTAATTCGGAGAATTTGAAAGTTTCAAATGTTTCTGATAGTTTTGCTGTTTTGGCAGCAGGGAGGACCGCTGTATGCGGAGTTTTGAATGCTTCCGGTGATTTGAGATGTTGGGGTGATATTGAACCTCCGTTGAAAACGGAGGTTCGTTTTGTTTCCCTTTCTGGAGGGGCGCGTCATTTTTGTGGTGTTCGAGAGGATAATCATGTGATTGAATGTTGGGGTAATTTGAATTCATCTTTGGTTCCTAAAGGTTATGGCTTTATGGCAATTGCTTCTTCTGATTATACTACTTGTGGTATAAGGGAAGCTGATCTTCTTTTAGATTGTTGGTTGGTCAACGCTTCAAAGCCTGATTTTGACCCACCTTTAGAGCTTTCAAGTCCTGGTCTTTGTAGGTCAAGTTCTTGTGAAGCTAATGAATTTGATTTCAATGTTAGTGTTCTTAATCAACCAGATTTGACAAGTTTATGTGTTAGACAAGATTTGAGGATTTGTTCACCTTGTGGGTATAATTGTTCACAAGGTTTCTTTTTGTCTAGTCCTTGCACACAAAATTCTGATAGAGTTTGCACAGCCTGTTCTCTTTGTCAGAACAGTTCTTGTTTGAATGTTTGTAAACTTCATTCTTCAAATGGGTTTTGGCATTGGCATCATATTCGTAGATGGGTTCTAATAATTGGATCTTCTGTTTTGTGTTTGTTGTTGATTTTGACTTGTGGGTGTATTCTTCGATGTTCGACGGGTTCAAGGAGAAAACATGGCACAAAGAAACAATCCAAGTCTTGTATTGGTAAACATGAACAAGAGAATGATGATGAGGTCAATGGTAATGGTAATGGTCTTCTTCACTCGGCTTCTTCGGCTGCGTCTTGTCCTGGTTTGCCTCAGGTTTTTAGGCTTTCGGAGTTGAAAGATGCTACTAATGGTTTCAAGGAGTTTAATGAGCTCGGGCGAGGAAGTTATGGGTTTGTTTACAAAGCTGCTTTGGCTGATGGGAGGATTGTTGCTGTTAAGAGAGCGAACGCTGCGACGATAATTCACACCAACAATCGTGACTTTGAAATGGAATTGGAAATTTTGTGCAAAATTCGGCATGTTAATATTGTTAACTTGTTGGGTTACTGTGCTGAGATGGGTGAGAGGTTGCTTGTTTATGAGTATATGTCTCATGGAACACTTTCTGATCACATTCACGGTGGTCTTTCTCCTCTCAATTGGAGCTTAAGGCTTAAGATAGCTATGCAAACTGCAAAGGGTATCGAGTACCTTCACAAAGAACTATTGCCTCCAATTGTTCACAAGGATCTCAAGAGTTCCAACATTCTTTTGGATTCAGAGTGGGGGGCTAGAGTTTCAGACTTTGGACTTCTTACTTCGAGTGATAAAGATCTTATCAGTGACTTGGAAAGCGATGTTTACAGCTTCGGGATTGTGTTGTTGGAGATTCTAAGTGGAAGGAAGGCCTATGATAGAGATTTTGATCCACCTAATGTTGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGTAAGGCAGCTGCCGTAATTGATCGCAATGTCGCTCTTCCGAGAAATGTCGAGCCTTTGCTTAAGCTTGGCGATATAGCAGAGCTTGCTGTGAGAGAGAATCCGAGTGAGCGTCCATCAATGTCGGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGATGGATTGATCTTATAA 2307 0.4148 MHIPFKPLLFILFFFFFHGTNSFGTMGPISASFGEYELFCSIDASGKQDVICWGKNTTSPQTPSSSSYVNNIPAMSALSGGEGFLCGILANTSQVFCWAATSKQNADPILVPPAYRTTAYSHVAAGQNHVCAVRGSYYSDRDSGTVDCWEIAKRSKNGTLMAVINESFDDQSVTNLEMNRVVSGEGFTCGEVRDGGLVCWGPNSENLKVSNVSDSFAVLAAGRTAVCGVLNASGDLRCWGDIEPPLKTEVRFVSLSGGARHFCGVREDNHVIECWGNLNSSLVPKGYGFMAIASSDYTTCGIREADLLLDCWLVNASKPDFDPPLELSSPGLCRSSSCEANEFDFNVSVLNQPDLTSLCVRQDLRICSPCGYNCSQGFFLSSPCTQNSDRVCTACSLCQNSSCLNVCKLHSSNGFWHWHHIRRWVLIIGSSVLCLLLILTCGCILRCSTGSRRKHGTKKQSKSCIGKHEQENDDEVNGNGNGLLHSASSAASCPGLPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALADGRIVAVKRANAATIIHTNNRDFEMELEILCKIRHVNIVNLLGYCAEMGERLLVYEYMSHGTLSDHIHGGLSPLNWSLRLKIAMQTAKGIEYLHKELLPPIVHKDLKSSNILLDSEWGARVSDFGLLTSSDKDLISDLESDVYSFGIVLLEILSGRKAYDRDFDPPNVVEWAVPLIKQGKAAAVIDRNVALPRNVEPLLKLGDIAELAVRENPSERPSMSDIASWLEQIVKDGLIL* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2203 768 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Mtr1g2203 768 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 26 766 - -
Mtr1g2203 768 PANTHER OS01G0750732 PROTEIN 26 766 - -
Mtr1g2203 768 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 337 392 IPR001368 GO:0005515
Mtr1g2203 768 Gene3D Transferase(Phosphotransferase) domain 1 590 765 - -
Mtr1g2203 768 SUPERFAMILY RCC1/BLIP-II 19 278 IPR009091 -
Mtr1g2203 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Mtr1g2203 768 Gene3D - 176 322 IPR009091 -
Mtr1g2203 768 Gene3D - 19 175 IPR009091 -
Mtr1g2203 768 SMART serkin_6 512 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2203 768 Gene3D Phosphorylase Kinase; domain 1 485 589 - -
Mtr1g2203 768 SUPERFAMILY Protein kinase-like (PK-like) 491 759 IPR011009 -
Mtr1g2203 768 MobiDBLite consensus disorder prediction 453 478 - -
Mtr1g2203 768 ProSiteProfiles Protein kinase domain profile. 512 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2203 768 Pfam Protein kinase domain 512 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2203 Mtr-Chr1 32326340 32329120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2203 10 760 Receptor kinase-like Gene Family AT3G59420 31.701 5.37e-111 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mtr1g2203 Pkinase 6.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2203 - - gmx:100814476 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2203 1 32326340 32329120 Mtr1g2203 1 32326340 32329120 ECH