Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2202 ATGGCGTCCACATCCAACAGGGGTCAAGGAGGAATTCAGCAATTGTTGGCTGCTGAGCAAGAAGCACAACGGATTGTGAATGCTGCGAAAAATGAAAAATCGGCTAGGTTGAAACAAGCCAAAGAAGAGGCTGAAAAGGAGATTGCTGCATACCGGGCTAAGCTTGAGGCCGAGTTTCAAAAGAAAGTGTCAGATAGTAGTGGTGATTCTGGAGCTAATGTCAAGCGACTTGACCAAGAAACTGAAGAAAAAATCCATCACCTGAAAACAGAGGCTGATAGAATTTCAGATGATGTTGTCGCCATGCTCCTTAAGCATGTAACAACTGTGAAAAAGTAG 339 0.4395 MASTSNRGQGGIQQLLAAEQEAQRIVNAAKNEKSARLKQAKEEAEKEIAAYRAKLEAEFQKKVSDSSGDSGANVKRLDQETEEKIHHLKTEADRISDDVVAMLLKHVTTVKK* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2202 112 Gene3D - 2 112 - -
Mtr1g2202 112 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 5 112 IPR005124 GO:0016471|GO:0046961|GO:1902600
Mtr1g2202 112 Coils Coil 12 61 - -
Mtr1g2202 112 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 5 112 - -
Mtr1g2202 112 Pfam Vacuolar (H+)-ATPase G subunit 9 111 IPR005124 GO:0016471|GO:0046961|GO:1902600
Mtr1g2202 112 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 8 111 IPR005124 GO:0016471|GO:0046961|GO:1902600
Mtr1g2202 112 MobiDBLite consensus disorder prediction 61 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2202 Mtr-Chr1 32309801 32312790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2202 5 111 Primary Pumps ATPases(2) AT3G01390 74.766 3.13e-43 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2202 K02152 - gmx:100306550 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2202 1 32309801 32312790 Mtr1g2202 1 32309801 32312790 ECH