Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2182 ATGCCACCATTATATAAACCTTATCACTTTCCATCCAAGTACTCATCACTACACTTCTCTCTCCCTCTCATTACATCCTATACTCTAGGCACTATGAAGTCAAGATTTTTGAAAGGATGTGTTAACAAATGCAAGAAAATGGGAAGTATAGTAAAAACTTGTGCTACTTGTGAAGATTGTTGTGAAAGAGGTTTATGGTCTTCTCTGCATGAAAGTTGCTCCATACCAAGTGATGTACCAAAAGGTCACATGGTTGTATATGTAGGAGAGAATCACAAAAGATATGTGATCAAAATTGCATTGCTTCATCATCCACTCTTCAAAGCCTTGTTGGATCAAGCTCAAGAAGAGTATGATTTCATGGCTGATTCAAAACTATGTATTCCTTGTCATGAACATCTTTTCCTAAGTGTCCTACGATGTGCTAGTTCCCCACAGAATCAAAGGATGTGTTTGTGTCTCTAA 465 0.3742 MPPLYKPYHFPSKYSSLHFSLPLITSYTLGTMKSRFLKGCVNKCKKMGSIVKTCATCEDCCERGLWSSLHESCSIPSDVPKGHMVVYVGENHKRYVIKIALLHHPLFKALLDQAQEEYDFMADSKLCIPCHEHLFLSVLRCASSPQNQRMCLCL* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2182 154 Pfam Auxin responsive protein 72 141 IPR003676 GO:0009733
Mtr1g2182 154 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 33 154 - -
Mtr1g2182 154 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 154 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2182 Mtr-Chr1 32039625 32040277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2182 41 149 Calmodulin-binding Proteins AT4G34750 38.596 3.23e-20 79.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2182 1 32039625 32040277 Mtr1g2182 1 32039625 32040277 ECH