Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2181 ATGGATCGGGAAGAATATTTGCGCAAGTGTTCCAATATGAAATGCCAAAGAGTTCAGCTTGATGAATCATATGTGCCCTCCCTTCAAGATGATGAAATGGAAGTTGAGCATTTGCTTGAAGAACCTAGAAATGATCATGTTTCATTGGATGGCACTTTAACTTCTCATACCGCTTTGAATGACAAAGATGATTTGGAACTAGAGGTCCTTGATGGATTCCTTGGAGATGGATTCCTGGATGATGTTGACATCAATGATCTTGAAGGAACTGATGTTTTCTCCAATGCATGTGGAGGGTATTTCTTGGATTTTGATTTGGCAAAGGTTGAGATACTAGAACATGGTGCTTATGAAGACTCGCCTTTGGAAAATTCAAATTCAGAAAGTCATTCTCCAGGATTTAGTGGCAGTAGCACTGTTGGTGGGATATCAGAATCAACAAAAGCACCCAATAGTACACAATCTAAATCCGAAATTAAATCTCTGGATGAGACAGTCATCCATGATACACATGGTGTCTTCAGGAACAATCCAAGTCAACCATCAAATGTAGATTGCATGTACAACATTTCACTTGATATACAGCATCTGCATGAGTTGAATAATGGTTATCCTTTAGCTGGTAGTATATTGTCTTGTAAGAAGGAAAATGTTACTGTTGAACAATGTCAATCTGCTCCACCTAGAGAGAAGAGATTCCGAAAGCCTACTCAGAGGTATATTGAAGAATCTTCAAATTTGAAGTCAAAAGAAAAAGTATCAACTACTGGTGTAAAACGTAAACGGCGGACTGTGTCATTAAGCAATGAGTTCCATACAAAAACTAAAGAATTGAAAGATATTCCAAGCGACGAGTCTAGTAGTGGGAATAGTGATGTGACACTTTCTGAGTTGCAACGCTGCAAGAAGCATCCAAAGAAAGAGAAGCTCGAGTATGACTATGAGCCTTTTTCATCGGAAGAGTCTGAGGATGAACATTTGACACCAAAAAGAGGCAGATCAAAAGATCGAAGAAAGAATCAAAGGATGTGGACAGTCTCTGAAGTGACAAAGTTGATTGACGGCATATCTCAATATGGAGTTGGTCGATGGACTGATATACAGAAGTTTTTGTTTTCTTCTGAAGGCTACCGAACTCCCACTGATGTCAGGGACAAGTGGCGTAACCTTTTAAGAGCCTGTACTGCACAGAAATTCAGCAATAAAGAGGATGAGCAAAATGATGAGACTGCCCCGCGGATCTTACCTTTTAGTGTGGCTAGCCGAGTGCTGGAATTGGCTCAAATTCACCCATACCCAAAGCGACGAAACAAAAAGAGATTCACCAGTGAAAGCTATGGTCCATCTAGTAGTCTTGGCAAAAGAAATTTACGTAGGAAGAAGTGTACTTAG 1392 0.3994 MDREEYLRKCSNMKCQRVQLDESYVPSLQDDEMEVEHLLEEPRNDHVSLDGTLTSHTALNDKDDLELEVLDGFLGDGFLDDVDINDLEGTDVFSNACGGYFLDFDLAKVEILEHGAYEDSPLENSNSESHSPGFSGSSTVGGISESTKAPNSTQSKSEIKSLDETVIHDTHGVFRNNPSQPSNVDCMYNISLDIQHLHELNNGYPLAGSILSCKKENVTVEQCQSAPPREKRFRKPTQRYIEESSNLKSKEKVSTTGVKRKRRTVSLSNEFHTKTKELKDIPSDESSSGNSDVTLSELQRCKKHPKKEKLEYDYEPFSSEESEDEHLTPKRGRSKDRRKNQRMWTVSEVTKLIDGISQYGVGRWTDIQKFLFSSEGYRTPTDVRDKWRNLLRACTAQKFSNKEDEQNDETAPRILPFSVASRVLELAQIHPYPKRRNKKRFTSESYGPSSSLGKRNLRRKKCT* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2181 463 MobiDBLite consensus disorder prediction 120 158 - -
Mtr1g2181 463 Pfam Myb-like DNA-binding domain 344 406 - -
Mtr1g2181 463 CDD SANT_TRF 342 392 - -
Mtr1g2181 463 PANTHER TRF-LIKE 8 8 461 - -
Mtr1g2181 463 MobiDBLite consensus disorder prediction 437 463 - -
Mtr1g2181 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 336 395 IPR017930 -
Mtr1g2181 463 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 8 461 - -
Mtr1g2181 463 MobiDBLite consensus disorder prediction 312 331 - -
Mtr1g2181 463 MobiDBLite consensus disorder prediction 119 158 - -
Mtr1g2181 463 MobiDBLite consensus disorder prediction 241 300 - -
Mtr1g2181 463 MobiDBLite consensus disorder prediction 312 341 - -
Mtr1g2181 463 MobiDBLite consensus disorder prediction 263 283 - -
Mtr1g2181 463 SUPERFAMILY Homeodomain-like 338 406 IPR009057 -
Mtr1g2181 463 SMART sant 340 393 IPR001005 -
Mtr1g2181 463 ProSiteProfiles Myb-like domain profile. 336 391 IPR001005 -
Mtr1g2181 463 Gene3D - 330 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2181 Mtr-Chr1 32020946 32027262 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr1g2181 Myb_DNA-bind_6 7.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2181 - - gmx:100810255 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2181 1 32020946 32027262 Mtr1g2181 1 32020946 32027262 ECH