Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2179 ATGAATTGTTTTCCATTCAACATCTACTACGGAGAAAAGAAGGGTGATGCTAAAGGCTTGCAAATGCAATCACTCTCGGGTCTATCAAACAACTCTACTTATGGCGGGAGCGACGTGAGAAGAACTGGTTCTGAATTGAATTCTCTGGATGCTTCCGACAACAGCTCCGACTCCCTTAGGAGGAATGCATTTCCCAATTTATCCCAAAGACCCAGCAACCTGAGAGTATTTACTGTATCAGAACTGAAATCAGCCACCAAAAATTTTGGTCGCTCTGTTATGCTTGGTGAGGGTGGATTCGGTTGTGTCTACAAGGGTTTGATCAAGAGTGTAGATGATCCTGCTAAAAAAATTGAAATTGCAGTTAAACAACTTGGTAAAAGAGGAATTCAGGGGCATAAGGAATGGGTGACTGAAGTGAATGTTCTTGGTATTGTTGAGCATCCCAATCTTGTGAAACTAGTTGGCTATTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTTTGGTATATGAATATATGCCCAACAGAAGCTTGGAACACCATTTATCCCCGCGATCAGAAACTCCTCTTCCATGGAGTAGGAGACTGAAAATAGCCCAAGATGCTGCTCGCGGCTTAACATACCTCCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGACGAGCAGTGGAATGCAAAGCTGTCTGACTTTGGATTAGCAAGATTGGGACCGTCTGATGGGTTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTATGCGGCTCCTGAATATATTCAAACAGGACGTCTCACTTCAAAGATTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATTACCGGCAGGCGTCCTTTAGATCGAAATCGCCCAAAGGGTGAGCAGCAGCTGTTGGAATGGATAAGACCATACCTTTCAGATGTGAAGAAGTTTCAAATAATTTTGGATCCAAGACTTGAGAGGAAACACCTCTTAAAGTCAGCCCAAAAACTTGCTATAGTAGCTAACAGATGCTTGGTTAGAAACCCAAAGAATCGCCCTAAGATGAGTGAAGTATTAGAAATGGTTGATCGGATTGTGGAGTCTTCGGTGAGTACTAATCAACAACCACCCTTGAATAGTGTAGCCTCAGCCGATGATTCTCAGGACACTGAAATAAATAACAAGAAGAGAATCATGGATCCAAAACCAGATTGTAATTGGTTTAGGTTGTGGAGACCAAAACTTTTAAGAACATGCTGA 1284 0.4221 MNCFPFNIYYGEKKGDAKGLQMQSLSGLSNNSTYGGSDVRRTGSELNSLDASDNSSDSLRRNAFPNLSQRPSNLRVFTVSELKSATKNFGRSVMLGEGGFGCVYKGLIKSVDDPAKKIEIAVKQLGKRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSLEHHLSPRSETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYIQTGRLTSKIDVWSYGVFLYELITGRRPLDRNRPKGEQQLLEWIRPYLSDVKKFQIILDPRLERKHLLKSAQKLAIVANRCLVRNPKNRPKMSEVLEMVDRIVESSVSTNQQPPLNSVASADDSQDTEINNKKRIMDPKPDCNWFRLWRPKLLRTC* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2179 427 SUPERFAMILY Protein kinase-like (PK-like) 66 370 IPR011009 -
Mtr1g2179 427 Gene3D Phosphorylase Kinase; domain 1 69 174 - -
Mtr1g2179 427 Pfam Protein kinase domain 93 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2179 427 MobiDBLite consensus disorder prediction 377 400 - -
Mtr1g2179 427 CDD STKc_IRAK 95 373 - -
Mtr1g2179 427 ProSitePatterns Protein kinases ATP-binding region signature. 95 123 IPR017441 GO:0005524
Mtr1g2179 427 PANTHER KINASE 1B 9 416 - -
Mtr1g2179 427 ProSiteProfiles Protein kinase domain profile. 89 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2179 427 PANTHER OS01G0588500 PROTEIN-RELATED 9 416 - -
Mtr1g2179 427 MobiDBLite consensus disorder prediction 377 396 - -
Mtr1g2179 427 Gene3D Transferase(Phosphotransferase) domain 1 175 397 - -
Mtr1g2179 427 MobiDBLite consensus disorder prediction 31 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2179 Mtr-Chr1 31994515 31999027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2179 1 367 Glycoside Hydrolase AT3G07070 43.514 2.38e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr1g2179 Pkinase 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2179 - - gmx:100305438 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2179 1 31994515 31999027 Mtr1g2179 1 31994515 31999027 ECH