Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2177 ATGTCTTCATCAGAGGTAGTTATCCACACATTCTCTCAAACCCAATCAGAAACCAAACCTTCCACCGCCGTAACAACCACCGTCGCCACCACCTCTTCCGATCCCAACACCAAACTCACCGTCCGAAGACCTGCCTCTCGATCCACCAAAGACCGTCACACCAAAGTTAACGGCCGTGGCCGCCGTGTCCGTATGCCGCCACTCTGCGCCGCTAGAATCTTCCAGCTCACACGTGAGCTAGGTCACCGTTCCGACGGTGAAACAATCGAGTGGCTTCTTCGTCATGCTGAGCCGTCGATCATCGCCGCTACAGGTACCGGAACTGTCCCCGCCGGACCGGTTTCCACATCTTCTCCGTTTACGTCTTCCTCGTTGCCGTCGGTTTCTTGTCATGTTCAGCCTGCGACGACTGTTGGTCCCGGCGGTGGAGGGATTTTCGGTATGGCGTTGCCGATGCAGCCGCCGAGCTGCCGTCTTGACCTGTCTCAGCCGGCAGGGATGGATTACGGCACGGCGAGTAGGTATCATCATATGCCGTTCACGACGCTGCTTTTGCAACCGACGACGACGGGGGAGGAGAATCAGCAAGAAGACGAAGAAAGTCTTAACGAACAATGA 618 0.5631 MSSSEVVIHTFSQTQSETKPSTAVTTTVATTSSDPNTKLTVRRPASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAGPVSTSSPFTSSSLPSVSCHVQPATTVGPGGGGIFGMALPMQPPSCRLDLSQPAGMDYGTASRYHHMPFTTLLLQPTTTGEENQQEDEESLNEQ* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2177 205 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 21 121 - -
Mtr1g2177 205 MobiDBLite consensus disorder prediction 186 205 - -
Mtr1g2177 205 ProSiteProfiles TCP domain profile. 49 103 IPR017887 -
Mtr1g2177 205 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 121 IPR005333 GO:0003700
Mtr1g2177 205 MobiDBLite consensus disorder prediction 1 43 - -
Mtr1g2177 205 MobiDBLite consensus disorder prediction 1 59 - -
Mtr1g2177 205 Pfam TCP family transcription factor 48 151 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2177 Mtr-Chr1 31962889 31963851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2177 49 190 TCP Transcription Factor Family AT2G37000 55.944 9.76e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr1g2177 TCP 2.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2177 - - cam:101510590 251.521