Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2168 ATGCTTAGTTCTTTTGTTGGTAAAGCACAAAAGAGTTTATCAGTCTTTGTACCCAGAAAGCATGCATTGAGCTACTGGAATGAAGATCATGCCACAACTGGGGTTGCCGATGATGTCATGAAAGGTTACTTTGCTGTTCTTGCAAAGAAGGGTGTAGAAACTAGAAGGTTTATTGTTGGGTTAGATTACTTAACTGATCCTGCTTTTTTGGGATTGCTTGATGATGCTTGGGAGGAGTATGGTTTTAGACAGAAGGGAACTCTTGTTGTTCCGTGTCGGCCGATAGAATTACAGAATATTTTAGATGGTCGGAAAATATAG 321 0.3988 MLSSFVGKAQKSLSVFVPRKHALSYWNEDHATTGVADDVMKGYFAVLAKKGVETRRFIVGLDYLTDPAFLGLLDDAWEEYGFRQKGTLVVPCRPIELQNILDGRKI* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2168 106 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 106 - -
Mtr1g2168 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 106 IPR003676 GO:0009733
Mtr1g2168 106 Pfam Auxin responsive protein 30 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2168 Mtr-Chr1 31850713 31851213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2168 9 93 Calmodulin-binding Proteins AT3G43120 37.634 6.10e-11 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2168 1 31850713 31851213 Mtr1g2168 1 31850713 31851213 ECH