Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2167 ATGCTTAGTTCTTTTGTTGGTAAAGTACAAAAGAGTTTATCACTCTTTGTACCGAGAAAGCATGCATTGAGCTACTGGAGTGAAGATCATGCCACAGCTGGGGTTGCCGATGATGTCATGAAAGGTTACTTTGCTGTTCTTGCAAGGAAGGGTGAGGAAACTAGAAGGTTTATTGTTGGATTAGATTACTTAACTGATCCTGCTTTTTTGGGATTGCTTGATGATGCTTCGGAGGAATATGGTTTCAGGCAGAAGGGAACTCTTGTTGTTCCATGTAGGCCGATAGAATTACAGAACATTTTAGATGGTCGGAAAACATAG 321 0.4081 MLSSFVGKVQKSLSLFVPRKHALSYWSEDHATAGVADDVMKGYFAVLARKGEETRRFIVGLDYLTDPAFLGLLDDASEEYGFRQKGTLVVPCRPIELQNILDGRKT* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2167 106 Pfam Auxin responsive protein 30 101 IPR003676 GO:0009733
Mtr1g2167 106 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 105 - -
Mtr1g2167 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2167 Mtr-Chr1 31844304 31844778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2167 38 93 Calmodulin-binding Proteins AT3G43120 48.214 4.36e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2167 - K14488 gmx:100818734 146.747