Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2166 ATGCTTAGTTCATTTGTTGAGAAGGTACAAAAGAGTTTATCAGTCTTTGTACCAAGAAAGCATGCATTGAGCTACTGGAGTGAAGATCATGCCACAACCACAGGTCACGAGCTTGCTGATGATGTTATGAAAGGTTACTTTGCTGTTCTTGCAAAGAAGGGTTTAGAAACTAGAAGATTTATTGTTGGGTTAGATTACCTAACTGATCCTGCTTTTTTGGGATTGCTTGATGATGCTTGGGAGGAGTATGGCTTCAGACAGAAGGGGACTCTTGTTGTTCCGTGTCGACCAATCGATTTACAGATCATTCTGGAGAAGAAGGCAGCACCAGCATCAAGATGA 342 0.4181 MLSSFVEKVQKSLSVFVPRKHALSYWSEDHATTTGHELADDVMKGYFAVLAKKGLETRRFIVGLDYLTDPAFLGLLDDAWEEYGFRQKGTLVVPCRPIDLQIILEKKAAPASR* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2166 113 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 107 - -
Mtr1g2166 113 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 107 IPR003676 GO:0009733
Mtr1g2166 113 Pfam Auxin responsive protein 34 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2166 Mtr-Chr1 31838851 31839640 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2166 27 96 Calmodulin-binding Proteins AT3G43120 42.857 8.05e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2166 - K14488 gmx:106795483 130.954