Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2165 ATGCTTGATTCATTTGTTGGGAAGGTACAAAAGAGTTTATCAGTCTTTGTACCAAGAAAGCATGCATTGAGCTACATAAATGAAGATCATGCCACAACCACAAGTGATCTTGCTGATGATGTTACGAAAGGTTACTTTGCTGTTCTTGCAAAGAAGGGTGTAGAAACTAGAAGGTTTATTGTTGGGTTAGATTACTTAACTGATCCTGCTTTTTTGGGATTGCTTGATGATGCTTGGGAGGAGTATGGTTTTAGACAGAAGGGAACTCTTGTTGTTCCGTGTCGGCCGATCGACTTGCAGAACATTCTAGATAGTCGGAAAACATAG 327 0.4006 MLDSFVGKVQKSLSVFVPRKHALSYINEDHATTTSDLADDVTKGYFAVLAKKGVETRRFIVGLDYLTDPAFLGLLDDAWEEYGFRQKGTLVVPCRPIDLQNILDSRKT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2165 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 107 IPR003676 GO:0009733
Mtr1g2165 108 Pfam Auxin responsive protein 33 104 IPR003676 GO:0009733
Mtr1g2165 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2165 Mtr-Chr1 31816857 31817605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2165 27 95 Calmodulin-binding Proteins AT3G43120 40.580 1.57e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2165 - K14488 gmx:100818734 134.806