Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2159 ATGTCACAAGATTCTGATGAAACTATAAAAACCTCCGAGGAATTGAAATGGTCTGAAATGCAAGGAGAACATTCATTATCCAAGGAACAAATGGAAGAAGAAGCTTCATTACCAAAGGACAAAAGTTGTGATGTTTCTAATGGAAATGAGAAGGTTAAGAATGTTGCTTCTGTTGGGTTTTGTGAGCTTTTCAGATTTGCTGATGGATTGGATTATGTTCTTATGATAATTGGAAGTTTAGGAGCTGTTGTTCATGGTTGTTCTTTGCCACTGTTTCTTCGGTTTTTTGCTGATCTTGTTAATTCTTTTGGTTCTAATGCTAATAATTTAGATAAGATGACCCAAGAAGTTGCTAAGTATGCTCTTTACTTTCTGATTGTTGGTGCTGCTATTTGGGCATCTTCATGGGCAGAGATTTCTTGTTGGATGTGGACTGGTGAGAGACAATCAACAAAGATGAGAATTAAGTATCTTGAAGCTGCTTTGGATCAAGATATTCAATTCTTTGATACCGAAGTTCGAACTTCCGATGTTGTTTTCGCTATTAACAGTGATGCTGTCATGGTACAAGATGCCATAAGTGAGAAGTTAGGTAATTTTGTTCACTATATGGCTACATTTGTTTCTGGATTTGCTGTTGGTTTCACTGCTGTTTGGCAATTAGCATTGGTTACACTTGCTGTGGTTCCTATGATAGCTGTAATTGGAGGCATTCATACTATCACTTTGGGCAAGTTATCTGGTAAAAGTCAAGAAGCTCTTTCTCAAGCTGGCAACATTGTGGAACAGACTATTGTGCAAATTAGAGTGGTGTTAGCATTTGTTGGGGAGACAAAAGCACTACAAGGCTATTCATCTGCTTTGAGGGTTGCTCAAAAGATTGGTTACAGAACTGGATTTGCAAAGGGAATTGGATTAGGTGCTACTTACTTTGTTGTTTTCTGCTGTTATGCACTCTTGTTATGGTATGGAGGCTATTTGGTTCGGCATGACTACACTAATGGAGGACTTGCAATTTCCACAATGTTTGCTGTCATGATTGGTGGATTGGCTTTAGGCCAGTCTGCACCAAGCATGATTGCATTTACAAAGGCAAGAGTTGCTGCTGCGAAAATCTTCGGTGTGATCGATCACAAGCCTTGTATAGACAAGAAAAGTGAATCAGGTTTGGAGTTAGAAACTGTGACAGGACTAGTGGAGCTTAAAAATGTAGACTTTTCATATCCATCAAGACCTGAAGTTCAGATCCTTCACGATTTCTCCTTGAGCGTTCCTTCTGGGAAGACCATAGCTTTGGTTGGAAGCAGTGGCTCTGGCAAGAGCACCATTGTGTCCCTCATTGAAAGATTCTACGACCCTTCTTCTGGACAAGTTTTGCTAGATGGACATGATGTGAAGACATTGAAGCTTAAATGGTTGAGACAACAGATAGGACTTGTGAGCCAAGAGCCAGCTTTATTTGCCACAACAATTAGAGAAAATATACTGTTGGGCAGGCCTGATGCTGATCAGGTTGAGATTGAAGAAGCTGCTAGAGTAGCTAATGCTCATTCATTCATCATCAAACTTCCTGATGGTTATGAAACTCAGGTAGGGGAAAGAGGGCTGCAATTATCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGGGCAATGCTGAAAAATCCAGCAATTCTTCTCCTAGATGAGGCTACAAGTGCACTGGACTCTGAGTCAGAAAAGCTGGTTCAAGAAGCTCTTGATAGGTTCATGATTGGTAGAACAACTCTTGTAATTGCGCATCGCCTCTCTACTATTCGCAAAGCTGACCTTGTTGCTGTACTTCAGCAAGGAAGTGTTTCCGAAATAGGAACTCATGATGAACTCTTTGCTAAAGGCGAAAATGGAGTTTATGCCAAGCTTATCAAAATGCAAGAGATGGCGAATGAAAGTTCCATGAGCAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGCGCTCGAAACTCTGTAAGCTCACCGATAATTACTCGGAATTCTTCATATGGTGGCCGGTCCCCATACTCAAGGAGGTTGTCGGACTTCTCTACATCGGACTTTAGTCTGTCCTTTGATGCATCACATCCAAACTTTAGGCTTGAAAAGCTTGCATTCAAAGACCAAGCTAGTTCCTTCTGGCGACTTGCGAAAATGAACTCTCCTGAATGGCTATATGCATTGATTGGTTCCATAGGCTCCATTGTTTGTGGATCCCTAAGTGCATTCTTTGCTTATGTTCTCAGTGCTGTACTCAGTGTCTATTACAATCCAAGCCACAAACACATGATTAGAGAAATTGAAAAATACTGCTACTTGTTAATTGGCCTTTCATCGGCTGCACTTGTATTCAATACATTGCAGCACTTCTTCTGGGATACTGTCGGCGAAAATCTGACTAAACGAGTGCGGGAGAAAATGTTGAGCGCGGTACTCAAAAATGAAATGGCATGGTTTGATCGAGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTAGCTCTTGATGCCAACAATGTTAGATCTGCCATTGGAGATCGGATTTCGGTAATTGTGCAGAACACTGCACTTTTGCTTGTTGCTTGTACTGCAGGGTTTGTATTGCAGTGGCGCCTTGCCCTTGTCCTCGTTGCTGTCTTCCCGGTTGTTGTTGCAGCAACCGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACTTGGAAGCCGCTCATGCTAAGGCTACACAACTAGCTGGAGAGGCTATAGCCAATGTAAGGACTGTTGCCGCCTTTAATTCGGAAAAGAAAATTGTTGGCCTTTTCGCCTCGAACCTTGAAACTCCACTACGACGCTGTTTTTGGAAGGGACAAATTTCTGGAAGTGGATATGGAATAGCACAGTTTGCACTCTATGCTTCATATGCTCTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAACACGGCATCTCTGATTTCTCTAAGACAATCCGAGTTTTTATGGTTCTCATGGTCTCTGCTAATGGTGCTGCCGAAACTTTAACCTTGGCTCCTGACTTCATTAAGGGAGGTCGAGCCATGAAGTCGGTTTTTGATCTCCTTGACCGTAGAACTGAAATTGAGCCAGATGATCCAGATGCTGTCATTGTCCCTGACCGTCTTCGTGGGGAAGTAGAACTCAAGCATGTTGACTTCTCTTATCCAAGCCGACCAGATATGCCGGTTTTCCGCGACCTTAGTCTTCGTGCAAGAGCAGGTAAAACTCTTGCCCTTGTAGGCCCTAGTGGATGCGGTAAGAGCTCGGTTATTGCACTCATACAAAGATTCTACGATCCAACGTCTGGCCGAGTCACGATTGATGGAAAGGACATAAGGAAATATAATCTCAAGTCCCTTAGAAGACACATTGCTGTGGTGCCTCAAGAGCCATGCCTATTTGCTACTACTATTTATGAAAACATTGCTTATGGTCATGAATCTGCTACCGAAGCCGAGATTATTGAGGCTGCAACTCTTTCCAATGCTCACAAGTTCATATCTTCTCTGCCAGATGGATACAAGACATTTGTTGGTGAACGAGGAGTTCAATTATCCGGCGGACAGAAGCAAAGAATAGCGATTGCTCGAGCTTTTGTGCGAAAGGCAGAACTTATGCTTCTTGATGAAGCAACAAGTGCACTTGATGCCGAATCCGAGAGGTCTGTTCAGGAGGCCCTCGAACGTGCCTGCTCGGGAAAAACAACTATCATTGTTGCACACAGGCTATCAACTATAAGGAATGCCAATCTCATTGCAGTGATTGATGATGGGACAGTTGAAGAACAAGGCTCACATTCACATTTGTTGAAAAATCACCCGGATGGGATCTATGCACGCATGATTCAGCTGCAAAGGTTGACAAATAGCCAAGTCGTTGGGACGGCCTCGAGTTCAAGTTCTTCAGCAAGAACAAAAGTAGATGAAAGAGAAGGCTAG 3966 0.4284 MSQDSDETIKTSEELKWSEMQGEHSLSKEQMEEEASLPKDKSCDVSNGNEKVKNVASVGFCELFRFADGLDYVLMIIGSLGAVVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVAKYALYFLIVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALDQDIQFFDTEVRTSDVVFAINSDAVMVQDAISEKLGNFVHYMATFVSGFAVGFTAVWQLALVTLAVVPMIAVIGGIHTITLGKLSGKSQEALSQAGNIVEQTIVQIRVVLAFVGETKALQGYSSALRVAQKIGYRTGFAKGIGLGATYFVVFCCYALLLWYGGYLVRHDYTNGGLAISTMFAVMIGGLALGQSAPSMIAFTKARVAAAKIFGVIDHKPCIDKKSESGLELETVTGLVELKNVDFSYPSRPEVQILHDFSLSVPSGKTIALVGSSGSGKSTIVSLIERFYDPSSGQVLLDGHDVKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPDGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYAKLIKMQEMANESSMSNARKSSARPSSARNSVSSPIITRNSSYGGRSPYSRRLSDFSTSDFSLSFDASHPNFRLEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSIVCGSLSAFFAYVLSAVLSVYYNPSHKHMIREIEKYCYLLIGLSSAALVFNTLQHFFWDTVGENLTKRVREKMLSAVLKNEMAWFDREENESARIAARLALDANNVRSAIGDRISVIVQNTALLLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFASNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFDLLDRRTEIEPDDPDAVIVPDRLRGEVELKHVDFSYPSRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVTIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHESATEAEIIEAATLSNAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALERACSGKTTIIVAHRLSTIRNANLIAVIDDGTVEEQGSHSHLLKNHPDGIYARMIQLQRLTNSQVVGTASSSSSSARTKVDEREG* 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2159 1321 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1055 1291 IPR003439 GO:0005524
Mtr1g2159 1321 SMART AAA_5 426 612 IPR003593 -
Mtr1g2159 1321 SMART AAA_5 1082 1274 IPR003593 -
Mtr1g2159 1321 MobiDBLite consensus disorder prediction 1 43 - -
Mtr1g2159 1321 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 638 IPR027417 -
Mtr1g2159 1321 CDD ABC_6TM_Pgp_ABCB1_D1_like 75 372 - -
Mtr1g2159 1321 ProSitePatterns ABC transporters family signature. 1194 1208 IPR017871 GO:0005524
Mtr1g2159 1321 Gene3D - 397 662 IPR027417 -
Mtr1g2159 1321 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 732 1019 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr1g2159 1321 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 399 635 IPR003439 GO:0005524
Mtr1g2159 1321 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 75 1298 - -
Mtr1g2159 1321 CDD ABC_6TM_Pgp_ABCB1_D2_like 721 1037 - -
Mtr1g2159 1321 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 76 364 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr1g2159 1321 Pfam ABC transporter 1074 1222 IPR003439 GO:0005524
Mtr1g2159 1321 Pfam ABC transporter 417 566 IPR003439 GO:0005524
Mtr1g2159 1321 Gene3D - 1046 1302 IPR027417 -
Mtr1g2159 1321 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 75 1298 IPR039421 -
Mtr1g2159 1321 SUPERFAMILY ABC transporter transmembrane region 63 383 IPR036640 GO:0005524|GO:0016021
Mtr1g2159 1321 CDD ABC_MTABC3_MDL1_MDL2 399 638 - -
Mtr1g2159 1321 SUPERFAMILY ABC transporter transmembrane region 719 1039 IPR036640 GO:0005524|GO:0016021
Mtr1g2159 1321 Pfam ABC transporter transmembrane region 733 1002 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr1g2159 1321 Pfam ABC transporter transmembrane region 75 348 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr1g2159 1321 Gene3D ABC transporter type 1, transmembrane domain 122 1028 IPR036640 GO:0005524|GO:0016021
Mtr1g2159 1321 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1046 1294 IPR027417 -
Mtr1g2159 1321 MobiDBLite consensus disorder prediction 645 678 - -
Mtr1g2159 1321 MobiDBLite consensus disorder prediction 1302 1321 - -
Mtr1g2159 1321 MobiDBLite consensus disorder prediction 7 43 - -
Mtr1g2159 1321 CDD ABC_MTABC3_MDL1_MDL2 1055 1294 - -
Mtr1g2159 1321 ProSitePatterns ABC transporters family signature. 538 552 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2159 Mtr-Chr1 31726165 31734671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2159 51 1318 Calmodulin-binding Proteins AT2G36910 87.313 0.0 2268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2159 K05658 - gmx:100777382 2239.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2159 1 31726165 31734671 Mtr1g2159 1 31726165 31734671 ECH