Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2112 ATGGAAACCGACACATGCAAGAGTAAGATTCAGATAAACGGTTACTTCGTTTACACACGCAGAAAGCGTAATCATCACCGCGATTTCGATAACGAAGAACCGAAGAGGCTGAAAATCTATGAAAATGCGGATGCGGTGAAGAACGACGTCGTTAAATGGACTTCGAAACGGCAACGGCGGCCGTCGTTTAAGGTGAAAGTTGATTCAGGTGAAGATGTTTCAGCTGCTGCTAAACTCGCTGCTGAGAGTGTTAAGATTGAGAAGAACGAAACGGTTGGTGAGAAGTGGTTGACTATGAAGGAGCTTTTTGATACTGGTTTTCTTGATGGTGTTCCGGTTGTTTATGTCGGTTGCAAAAAAGAGGCTATAAATTCGAGACTGGAGGGCGTGATTGCTGGTGGGGGGATATTGTGCTCATGCTGTCTGTGCAATGGACGCAGAATTATCCCCCCCTCCACGTTTGAGATTCATGCCTGTAATATATATAAGAGAGCAACACAGTATATTTGCTTTGAAAATGGGAAGAGTCTTCTTGAGCTATTGGGAGTATGCAGGGCGGCTCCCTCACATTCTATGGAAGCCACCATTCAAAATTTTCTTTGTTTACCGCCTGAAGAGAAGTATTTTACTTGCAGGAGCTGCAGAGGGGCTTTCCCTGTTTCAACTGTGAAAAGAGTGGGGCTTATATGCCATTCTTGCGTGGAAGCAAGCAAATCTGAAGACAGTCCTATTCGTGGAGTTGGCAAAAGAGTCAGGACTCCTCGACCATATCTGTTCTCTAGTCCATCTAGTATTTCTGAAACGTGTGTGTCATCACAAACTAAGAAACAACAGAAGAAGAGAACAAAGTCATCAAAACGGCTCAGCATGTCAAAATCTTCCAAGAAGAGTGCTTCTGTGGCTATTCTTACGCAGAAGAAAAGTTTGTGCAGCATGGAAACAAAGTCATCAAAAGTGTCAGTCAAGTTGAAGATTGCTCCAATTACTTCAAATTCGCAGTGTTCATCTCCACCAAATAAGAGTCAGTTGAGGATCAATAAGAAGCATCAGCGATTGCATAAATTAATTTTTGACGAAGATGGATTGCCTGATGGAGCTGAAGTAGCTTATTATGCACGTGGACAGAAACGGCTTGAGGGTATCAAAAAGAAATCCGGAATACTTTGTCGATGCTGTAACACCGAGATCAGCCCCGCACAGTTTGAGGTTCATGCAGGGTGGGCTTCTCGCAGGAAGCCTTATGCATACATCTACACGTCAAATGGGGTGTCTCTCCATGAGTTGGCATTATTCCTCTCAAAAGATCGCAAATGCACTGCCAAATATAATGATCTTGCATGCATTGTTTGTTGGGATGGTGGAAATTTGTTTCTCTGTGATGGATGCCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTACTCCACGACGTGGTCGGTACTGTCCAATCTGTCAACACATGTTCCTTGGAGAAGGATCTGTGGCTCTCAATCCTGATGCTGTGGCAGCTGGAAGGATTGAAGGAGTTGATCCTATAGAACAGATTGCCAAGAGATGCATTCGCATAGTGAAAGACTTTGAAGCGGAGACTGGTGGATGTGCTTTATGCAGGGGTTCTGACTTCAGCAGATCAGGATTTGGTCCACGTACAATAATAATTTGTGATCAGTGTGAAAAGGAATATCATGTGGGCTGTTTGAGGGATCATAAAATGGCATATTTGAAGGAATTGCCGGAAGGGGACTGGCTTTGTTGCAATGATTGCACAAGAATACATTCTATTTTGGAGAACCTCTTAGTTAGGGAAGCTGAGAAACTCCCTGAATCTCTTTTGGATGTTATAAAGAAAAAGCAAGAGGATAGATGTTTGGAACCCCTTAATGAGATTGATATAAGATGGAGACTTGTTAATGGCAAAGTTGCTTCTCCTGAAACCAGGCCGTTGCTTTTGGAGGCCCTGTCAATATTCAACGAATGCTTTGATCCTATAGTTGACGCAGCTACTGAACGTGACCTTATTCCTTCCATGGTTTATGGACGGAATTTGCAGACTCAGGATTTTGGAGGAGTGTACTGTGCATTATTAATGGTCAATTCATCTGTGGTATCTGCGGGCATGCTACGGATTTTTGGTACAGATATTGCAGAACTCCCATTAATTGCTACAAGACACAAGAACCGTGGAAAGGGCTACTTCCAAACACTGTTCTCGTGCATTGAAAGGCTGGTGGCCTTCTTGAATGTGAAGAACCTTGTGTTACCAGCTGCTGAAGAAGCAGAATCCATTTGGAAATATAAATTTGGGTTTAGCAGGACGAAACCTGAGCAGCTTACCAACTTTAGAAAGAACTGCCAACAGTTGATGGCATTCAAAGGGACAGTTATGCTTCACAAATCGGTGCCTCGATGTCGGATCATTCATAGTCAGTCATGA 2439 0.4334 METDTCKSKIQINGYFVYTRRKRNHHRDFDNEEPKRLKIYENADAVKNDVVKWTSKRQRRPSFKVKVDSGEDVSAAAKLAAESVKIEKNETVGEKWLTMKELFDTGFLDGVPVVYVGCKKEAINSRLEGVIAGGGILCSCCLCNGRRIIPPSTFEIHACNIYKRATQYICFENGKSLLELLGVCRAAPSHSMEATIQNFLCLPPEEKYFTCRSCRGAFPVSTVKRVGLICHSCVEASKSEDSPIRGVGKRVRTPRPYLFSSPSSISETCVSSQTKKQQKKRTKSSKRLSMSKSSKKSASVAILTQKKSLCSMETKSSKVSVKLKIAPITSNSQCSSPPNKSQLRINKKHQRLHKLIFDEDGLPDGAEVAYYARGQKRLEGIKKKSGILCRCCNTEISPAQFEVHAGWASRRKPYAYIYTSNGVSLHELALFLSKDRKCTAKYNDLACIVCWDGGNLFLCDGCPRAFHKECASVSSTPRRGRYCPICQHMFLGEGSVALNPDAVAAGRIEGVDPIEQIAKRCIRIVKDFEAETGGCALCRGSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGDWLCCNDCTRIHSILENLLVREAEKLPESLLDVIKKKQEDRCLEPLNEIDIRWRLVNGKVASPETRPLLLEALSIFNECFDPIVDAATERDLIPSMVYGRNLQTQDFGGVYCALLMVNSSVVSAGMLRIFGTDIAELPLIATRHKNRGKGYFQTLFSCIERLVAFLNVKNLVLPAAEEAESIWKYKFGFSRTKPEQLTNFRKNCQQLMAFKGTVMLHKSVPRCRIIHSQS* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2112 812 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 684 776 IPR016181 -
Mtr1g2112 812 MobiDBLite consensus disorder prediction 244 299 - -
Mtr1g2112 812 MobiDBLite consensus disorder prediction 257 275 - -
Mtr1g2112 812 ProSiteProfiles Zinc finger PHD-type profile. 444 489 IPR019787 -
Mtr1g2112 812 MobiDBLite consensus disorder prediction 276 290 - -
Mtr1g2112 812 SMART PHD_3 446 487 IPR001965 -
Mtr1g2112 812 SMART PHD_3 534 591 IPR001965 -
Mtr1g2112 812 Gene3D - 631 798 - -
Mtr1g2112 812 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 38 808 - -
Mtr1g2112 812 Pfam Tify domain binding domain 383 429 IPR032308 -
Mtr1g2112 812 Pfam Tify domain binding domain 129 181 IPR032308 -
Mtr1g2112 812 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 531 593 IPR013083 -
Mtr1g2112 812 PANTHER AUTOIMMUNE REGULATOR 38 808 - -
Mtr1g2112 812 SUPERFAMILY FYVE/PHD zinc finger 442 489 IPR011011 -
Mtr1g2112 812 SUPERFAMILY FYVE/PHD zinc finger 526 588 IPR011011 -
Mtr1g2112 812 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 433 517 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2112 Mtr-Chr1 31127659 31138313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2112 98 808 PHD Transcription Factor Family AT2G36720 50.826 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2112 - - gmx:100798276 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3152 7 48522289 48534560 Mtr1g2112 1 31127659 31138313 PCT