Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2107 ATGGACACAATGTTGGTTCCTAAATGGCTCAAACCACTTCTTAGCACACCATTTTTCAATGAGTGTCGGATTCACGCCGACGCCGCGAGGAGTGAATGTAACATGTTTTGTCTAGATTGCAATGTTGATGCCTTTTGCTTCTATTGTCGTTCTTCAAAACACAAGGATCATCAAGTCATTCAGATAAGACGATCTTCATATCATGATGTAGTGAGGGTGGCTGAAATTCAGAAAATGTTGGACATTAGTGGAGTACAAACTTATGTGATCAATAGTGCTAGAGTTTTATTTCTGAATGAGAGGCCTCAACCAAAATCTGGAAAAGCAGTTCCTTACATTTGTGAGATTTGTGGAAGAGGCCTTTTAGACCAAGTTCGTTTCTGTTCTTTGGGATGTAAGCTTGTAGGAATAAAGAGAAATGGGAATGCAAGCTTTGTTTTAGATGCAAATAACAATGAGGTATCAACAATGGAAGAAGGAATGTCAAGACAACAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGGCATGTATCCAGCAACTCCTCCAACACCTCCTTCAAACGCAAGAAGAAGAAAAGGGATTCCTCATAGAGCTCCTTTTGGACCCTAG 612 0.4036 MDTMLVPKWLKPLLSTPFFNECRIHADAARSECNMFCLDCNVDAFCFYCRSSKHKDHQVIQIRRSSYHDVVRVAEIQKMLDISGVQTYVINSARVLFLNERPQPKSGKAVPYICEICGRGLLDQVRFCSLGCKLVGIKRNGNASFVLDANNNEVSTMEEGMSRQQEEELREGSQQGMYPATPPTPPSNARRRKGIPHRAPFGP* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2107 203 Pfam PLATZ transcription factor 63 134 IPR006734 -
Mtr1g2107 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 202 - -
Mtr1g2107 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 202 - -
Mtr1g2107 203 SUPERFAMILY B-box zinc-binding domain 21 64 - -
Mtr1g2107 203 MobiDBLite consensus disorder prediction 156 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2107 Mtr-Chr1 31039303 31041219 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mtr1g2107 PLATZ 2.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2107 - - gmx:100809455 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3156 7 48573537 48576270 Mtr1g2107 1 31039303 31041219 PCT