Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2100 ATGTATGAAAAGCTAATTATAAACTCTAGATTATTAATTAACAAAGAACAAACCAATATCATGGAACTCTCTCTTCTCAACCATCATCACCATCCTTCACTTCTTCATTGCACTCTCACATCCAATCTCTTGACAAGAACACACAAAAGACTTTACAAAAAAAGTTCAAATAGGTTAATACCATCATGCAGCTGTTCACATTCTTCCTCCCATAAAACTGTTGTAGAACCAATCTCTATGTCTTTACAAATTGAAGGAAGGAGAGCATTACTCACTTCTCTCCTCACAACATTTGCTGGAGTTTATGCATGTGATGTGGCTGAAGCTGTTAGCACTAGTAGAAGAGCTCTAAGAGGAGCCAAAATTCCTGAAAGTGATTTCAAAACTTTGCCCAATGGTCTCAAGTACTATGATTTGAAGGTTGGCGATGGAGCTGAAGCTGTGAAAGGATCGCGTGTCGCAATTCACTATGTTGCTAAATGGAGGGGAATCACCTTCATGACTAGTAGGCAAGGAATGGGTGTTGGAGGAGGAACGCCCTACGGATTTGATGTAGGCGAATCTGCGAGAGGAAATGTCTTAAAAGGTTTGGATGTAGGAGTAGAGGGCATGCGAGTTGGAGGCCAGCGGTTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAGGGGAGTCCAAGAAATCCCTCCAAATGCAACAATTGAGATGGATATTGAACTGCTTGCCATAAAACAAAGTCCATTTGGGACTGCCGTGAAGATTGTTGAAGGCTAA 774 0.4147 MYEKLIINSRLLINKEQTNIMELSLLNHHHHPSLLHCTLTSNLLTRTHKRLYKKSSNRLIPSCSCSHSSSHKTVVEPISMSLQIEGRRALLTSLLTTFAGVYACDVAEAVSTSRRALRGAKIPESDFKTLPNGLKYYDLKVGDGAEAVKGSRVAIHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESARGNVLKGLDVGVEGMRVGGQRLLIVPPELAYGSRGVQEIPPNATIEMDIELLAIKQSPFGTAVKIVEG* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2100 257 SUPERFAMILY FKBP-like 103 244 - -
Mtr1g2100 257 Gene3D - 106 251 IPR046357 GO:0003755
Mtr1g2100 257 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 150 244 IPR001179 GO:0003755
Mtr1g2100 257 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 33 257 - -
Mtr1g2100 257 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 33 257 - -
Mtr1g2100 257 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 146 241 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2100 Mtr-Chr1 30954021 30957483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2100 150 244 Calmodulin-binding Proteins AT5G48570 40.206 3.66e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2100 - - gmx:100815603 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2100 1 30954021 30957483 Mtr1g2100 1 30954021 30957483 ECH