Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2092 ATGGTTCTCAAGACCGAATTGTGCCGATTCAGTGGTGCCAAGATCTACCCTGGTAGGGGGATCAGATTTATCCGTAGTGATTCTCAGGTTTTCCTGTTTGTCAACTCGAAATGTAAAAGGTATTTCCACAACAAGTTGAAGCCCTCAAAGCTTACATGGACTGCCATGTATAGGAAGCAACACAAGAAGGATATTGCCCAAGAAGCTGTGAAAAAGAGGCGTAGAGCTACCAAAAAGCCTTACTCAAGGTCCATTGTTGGTGCTACTTTGGAAGTTATTCAAAAGAAGAGATCAGAAAAGCCAGAGGTTCGGGATGCTGCCAGAGAAGCTGCCCTTCGTGAAATTAAGGAGAGGGTGAAGAAAACAAAGGATGAGAAGAAGGCGAAGAAGGCAGAAAGTCAAGCTAAGGCACAAAAATCTGTTGGAAAAGGCAATGTTTCTAAAGGTGCATCAAAAGGTCCTAAGCTTGGTGGTGGAGGAGGGAAGCGCTGA 492 0.4472 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIKERVKKTKDEKKAKKAESQAKAQKSVGKGNVSKGASKGPKLGGGGGKR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2092 163 MobiDBLite consensus disorder prediction 114 136 - -
Mtr1g2092 163 Gene3D - 69 141 - -
Mtr1g2092 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Mtr1g2092 163 Coils Coil 112 136 - -
Mtr1g2092 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Mtr1g2092 163 MobiDBLite consensus disorder prediction 114 163 - -
Mtr1g2092 163 PANTHER 60S RIBOSOMAL PROTEIN L24 3 163 - -
Mtr1g2092 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Mtr1g2092 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Mtr1g2092 163 SMART 4TRASH 8 46 IPR011017 -
Mtr1g2092 163 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Mtr1g2092 163 PANTHER 60S RIBOSOMAL PROTEIN L24 3 163 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2092 Mtr-Chr1 30877957 30880168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2092 1 151 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 88.079 1.94e-86 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2092 K02896 - csv:101206866 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2092 1 30877957 30880168 Mtr1g2092 1 30877957 30880168 ECH
Mtr7g3174 7 48731098 48733101 Mtr1g2092 1 30877957 30880168 PCT