Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2090 ATGATGGAAGCTAATGCCATGTTTTCCACCATCACTCCTTCTGGTTTGTTAGGAGTAGTTGATAATATCCCTTTACACCAACAACAACAACAACAAAAACAACAGAATCTTCCTAATCAACAACAACAAAATCCTCATCAATTGCACCATTCCCAAGTTGTTTCCTATGCTCCCCAACATCATGACACTGACACAAATCAACATCATCATCATTCAATGAAACATGGGTTTCCTCCATTTTCTTCATCCAAGAACAAACAGCAACAACAAAGTTCTCAGATGAGTGATGAAGATGAACCAAATTTTCCAGCTGAAGAAAGCTCTGGTGGTGACCCAAAAAGGAAGATTTCACCATGGCAAAGAATGAAATGGACTGATACAATGGTAAGGCTATTGATAATGGCTGTTTATTACATTGGTGATGAAGCTGGTTCTGAAGGGACTGATCCAAATAAGAAAAAGTCTAGTGGTTTGTTACAGAAGAAGGGAAAGTGGAAATCTGTTTCAAGGGCTATGATGGAAAAAGGGTTTTATGTGTCACCTCAACAATGTGAAGATAAGTTTAATGATTTGAATAAAAGGTATAAGAGAGTGAATGATATACTTGGTAAAGGAACAGCTTGTAGAGTTGTTGAGAATCAAGGTTTGTTGGATTCAATGGATTTGTCACCTAAGATGAAAGATGAAGTTAGGAAATTGCTTAATTCTAAACATCTTTTCTTTAGGGAAATGTGTGCTTATCATAATAGTTGTGGCCATGGTGGTGTTGCTACTTCTAATGTTCAACATCAAGTAGAGGGTGGAAGTGGAACAACAACACCACCTCAGAATCAACCTCAACAACAGCATCAACACCAGCACCAGCAGCAGAACCAACAACATTGTTTTCATTCATCAGAGAATGGTGTAGGGAGTTTAGGTGTTTCAAGAGGAGAAGGATTGAGGATGTTGAAAATAGGAAGTGGATATGTTGAAGAAGAGGATGATGAAGATGAAGAGGATGAGTCAGAGGACTTTTCTGATGAGGGTGAAGATGAATCAGGAGAAGGTTGTTCAAAGGGTCATATAAATGATCAAGATGAAGAAGAGAATGATGGAAAACCATCAAGAAAAAGAGCAAGAAAAGGAGGATTTTCATTTCCAAGGTCATCATCATCAACACAATTGGTGAATCAAATGAACAATGAAATAAGTGGTGTGTTTCAAGATGGAGGTAAGAGTACTTGGGAGAAAAAGCAATGGATAAGAAACAGGATAATGCAGTTGGAGGAACAGAAAATAGGATATGAATCACAAGCATTTCAGCTTGAAAAGCAAAGGTTGAAATGGGCAAGGTATAGTAGTAAGAAAGAGAGGGAAATGGAGAGAGCTAAACTTGAGAATGAAAGGAGAAGATTAGAAAATGAGAGAATGGTTTTGCTTATTAGGAAGAAAGAGCTTGAGTTGATGCATATTCAGCAGCAGCAGCAGCAGCAACACTCTTCTACCTAG 1491 0.3803 MMEANAMFSTITPSGLLGVVDNIPLHQQQQQQKQQNLPNQQQQNPHQLHHSQVVSYAPQHHDTDTNQHHHHSMKHGFPPFSSSKNKQQQQSSQMSDEDEPNFPAEESSGGDPKRKISPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPNKKKSSGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQGLLDSMDLSPKMKDEVRKLLNSKHLFFREMCAYHNSCGHGGVATSNVQHQVEGGSGTTTPPQNQPQQQHQHQHQQQNQQHCFHSSENGVGSLGVSRGEGLRMLKIGSGYVEEEDDEDEEDESEDFSDEGEDESGEGCSKGHINDQDEEENDGKPSRKRARKGGFSFPRSSSSTQLVNQMNNEISGVFQDGGKSTWEKKQWIRNRIMQLEEQKIGYESQAFQLEKQRLKWARYSSKKEREMERAKLENERRRLENERMVLLIRKKELELMHIQQQQQQQHSST* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2090 496 Coils Coil 419 439 - -
Mtr1g2090 496 MobiDBLite consensus disorder prediction 263 305 - -
Mtr1g2090 496 PANTHER F16F4.11 PROTEIN-RELATED 2 496 - -
Mtr1g2090 496 Pfam Myb/SANT-like DNA-binding domain 121 246 IPR044822 -
Mtr1g2090 496 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 2 496 - -
Mtr1g2090 496 MobiDBLite consensus disorder prediction 78 98 - -
Mtr1g2090 496 MobiDBLite consensus disorder prediction 27 119 - -
Mtr1g2090 496 MobiDBLite consensus disorder prediction 346 372 - -
Mtr1g2090 496 MobiDBLite consensus disorder prediction 263 309 - -
Mtr1g2090 496 MobiDBLite consensus disorder prediction 27 61 - -
Mtr1g2090 496 Coils Coil 447 483 - -
Mtr1g2090 496 MobiDBLite consensus disorder prediction 143 162 - -
Mtr1g2090 496 MobiDBLite consensus disorder prediction 322 389 - -
Mtr1g2090 496 Gene3D - 124 197 - -
Mtr1g2090 496 MobiDBLite consensus disorder prediction 324 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2090 Mtr-Chr1 30861437 30863430 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr1g2090 Myb_DNA-bind_4 6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2090 - - cam:101509296 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2090 1 30861437 30863430 Mtr1g2090 1 30861437 30863430 ECH
Mtr7g3178 7 48770696 48772590 Mtr1g2090 1 30861437 30863430 PCT