Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2087 ATGAACTATGTCATCATGTTCTTCTTCTTCCTCTTCCTAAGCATCTACATTGTACCATGTCTAACACATAATGACACACAAGCACTTACTCTTTTCCGCCAACAAACCGACACACACGGTCAACTCCTTACCAACTGGACCGGACCTGAGGCTTGCTCGGCCTCATGGCACGGTGTCACTTGCACGCCAAACAACCGTGTCACAACCCTCGTACTTCCTTCCCTCAATCTCCGAGGACCCATTGACGCTCTTTCTTCTCTCACCCATCTACGCCTCCTTGATCTCCATAACAACCGCCTGAATGGCACTGTTTCAGCGTCTCTCCTATCCAACTGCACAAACCTCAAACTCCTCTACCTTGCCGGAAACGACTTTTCCGGCCAAATCCCACCGGAAATCTCCTCCCTAAACAACCTCCTCCGTCTTGACCTCTCCGACAACAACCTCGCTGGAGATATTCCTAACGAAATCTCCCGTTTAACTAACCTTCTCACATTAAGGCTTCAGAACAACGCACTCTCTGGTAACATCCCTGACCTCTCTTCCATTATGCCGAATCTCACAGAGCTCAACATGACAAACAATGAATTCTACGGCAAAGTACCGAACACAATGCTTAACAAATTCGGAGATGAAAGCTTCTCCGGCAATGAAGGTTTATGTGGTTCAAAACCTTTCCAAGTTTGTTCCTTAACAGAGAACAGTCCTCCTTCCTCTGAACCGGTTCAGACAGTTCCTTCAAACCCGAGTTCTTTCCCTGCAACAAGCGTGATCGCAAGACCAAGAAGCCAACATCATAAAGGGTTAAGCCCTGGTGTAATTGTAGCAATTGTGGTGGCAATTTGTGTTGCATTGTTAGTGGTAACATCGTTTGTTGTTGCTCACTGTTGTGCCAGAGGGAGAGGTGTTAATAGTAATTCCTTAATGGGTAGTGAGGCTGGGAAGAGAAAGAGTTATGGTAGTGAGAAGAAGGTGTATAATTCAAATGGTGGGGGTGGTGATAGTAGTGATGGGACTAGTGGAACTGATATGAGTAAGCTTGTGTTTTTTGATAGGAGGAATGGATTTGAGTTGGAAGATTTGTTGCGTGCATCTGCTGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAGGGCAGTGCTTGATGATGGTAGTACGGTTGCTGTCAAGAGGCTTAAAGATGCAAATCCTTGTGCTAGGCATGAATTTGAACAGTATATGGATGTGATTGGGAAGCTTAAACACCCTAACATTGTTAAACTTAGAGCTTATTATTATGCCAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCTCCAATGGGAGCTTGCATGCTCTTCTTCATGGGAACCGTGGACCAGGGAGGATTCCATTGGATTGGACAACAAGAATAAGCTTGGTATTGGGAGCAGCAAGAGGGCTTGCTAGGATCCATACAGAGTACAGTGCAGCAAAAGTGCCACATGGGAACGTGAAATCATCCAATGTACTACTTGACAAGAACGGTGTTGCTTGCATATCTGACTTTGGGTTGTCACTACTGTTAAACCCTGTTCATGCAACTGCACGATTGGGTGGGTACAGAGCACCTGAACAGACAGAACAAAAGAGACTGTCTCAGCAAGCTGATGTCTACAGTTTTGGAGTGTTGCTGTTGGAAGTTCTCACAGGGAAAGCTCCTTCGTTACAGTATCCTTCCCCGGCGAATCGCCCTCGTAAGGTCGAAGAGGAAGAAACTGTGGTGGATCTTCCCAAATGGGTTCGATCAGTCGTGAGAGAAGAGTGGACTGGGGAGGTTTTTGATCAAGAACTTCTGCGATACAAGAACATTGAGGAAGAGCTTGTGTCAATGCTGCATGTTGGGTTGGCTTGTGTGGTGCAGCAGCCAGAGAAGAGGCCAACTATGGTAGATGTTGTTAAAATGATTGAGGATATCAGAGTGGAGCAATCTCCTCTGTGTGAGGACTATGACGAATCACGCAATTCGCTTTCACCTTCCATTCCCACCACTGAAGATGGTCTTGCTTAG 2031 0.4594 MNYVIMFFFFLFLSIYIVPCLTHNDTQALTLFRQQTDTHGQLLTNWTGPEACSASWHGVTCTPNNRVTTLVLPSLNLRGPIDALSSLTHLRLLDLHNNRLNGTVSASLLSNCTNLKLLYLAGNDFSGQIPPEISSLNNLLRLDLSDNNLAGDIPNEISRLTNLLTLRLQNNALSGNIPDLSSIMPNLTELNMTNNEFYGKVPNTMLNKFGDESFSGNEGLCGSKPFQVCSLTENSPPSSEPVQTVPSNPSSFPATSVIARPRSQHHKGLSPGVIVAIVVAICVALLVVTSFVVAHCCARGRGVNSNSLMGSEAGKRKSYGSEKKVYNSNGGGGDSSDGTSGTDMSKLVFFDRRNGFELEDLLRASAEMLGKGSLGTVYRAVLDDGSTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNIVKLRAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHTEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHATARLGGYRAPEQTEQKRLSQQADVYSFGVLLLEVLTGKAPSLQYPSPANRPRKVEEEETVVDLPKWVRSVVREEWTGEVFDQELLRYKNIEEELVSMLHVGLACVVQQPEKRPTMVDVVKMIEDIRVEQSPLCEDYDESRNSLSPSIPTTEDGLA* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2087 676 MobiDBLite consensus disorder prediction 323 340 - -
Mtr1g2087 676 MobiDBLite consensus disorder prediction 232 255 - -
Mtr1g2087 676 SUPERFAMILY Protein kinase-like (PK-like) 367 643 IPR011009 -
Mtr1g2087 676 Gene3D Transferase(Phosphotransferase) domain 1 439 664 - -
Mtr1g2087 676 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Mtr1g2087 676 MobiDBLite consensus disorder prediction 307 340 - -
Mtr1g2087 676 PANTHER LRR RECEPTOR-LIKE KINASE 11 667 - -
Mtr1g2087 676 Pfam Protein kinase domain 367 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2087 676 MobiDBLite consensus disorder prediction 654 676 - -
Mtr1g2087 676 SUPERFAMILY L domain-like 22 207 - -
Mtr1g2087 676 ProSiteProfiles Protein kinase domain profile. 363 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2087 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 667 - -
Mtr1g2087 676 Gene3D Phosphorylase Kinase; domain 1 340 438 - -
Mtr1g2087 676 Gene3D Ribonuclease Inhibitor 20 85 IPR032675 -
Mtr1g2087 676 Gene3D Ribonuclease Inhibitor 86 236 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2087 Mtr-Chr1 30830406 30833611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2087 21 672 Receptor kinase-like Gene Family AT2G36570 68.271 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr1g2087 Pkinase 1.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2087 - - gmx:102660494 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2087 1 30830406 30833611 Mtr1g2087 1 30830406 30833611 ECH
Mtr7g3180 7 48792228 48795529 Mtr1g2087 1 30830406 30833611 PCT