Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2075 ATGGAAATGCCTGCTAGAAGATCTAATTACTCGATTCTAAGTCAAGTTCCCGACGATCAATTCTCCTACGCCGCCAGCGCTAGTGCTCCGGCACCGTCGTCGTCGAGCGACGGAAAAGCTAGTAGAGGCGGTTGGGAGTTAGTCGGCGATCATCGGCAAGGGAACAATCGGATCGGGAATTTGAATTTGTATTCATCGATCGGATTACAGCGGCAGTCGAGTGGAAGTAGTTACGGCGAAAGTTCGTTAGCCAGCGGCGGTGATTATTATGCGCAGAATCTGTCGGCGGTGGCGGCTAGTGAGGTTGATGCGTTTGGTTATTTGCATGAGGTTGGTGAGGTGAGGGGGAAGTTGGCGGAAAGTGCGGCGTGGAACGGGGGATCGTCTGGTAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAGTTGCAGCTTGCGCTGGCTTTGAGGTTATCGTCGGATGCTACTTGTGCTGATGATCCGAATTTTCTGGATCCGGTGCCAGATGACGCGGCTTCGAGGCTTTCGGCATCGGCTGAGGCTGTTTCGCATCGATTTTGGGTGAATGGCTGCCTATCATACTCCGACAAAATTCCTGATGGCTTTTATCTGATTCATGGGATGGATTCCTATGTATGGACTGTGTGCACTGATCTGCAGGAAAACAGCCGAATCCCATCAGTTGATACTCTAAAGTCTGTACATCCCCGCATTGATTCTTCCCTTGATGTAGTTTTGGTGGATCGGCGCAGTGATGCCAGCTTGAGAGAACTGCAAAACATGGTTCATAACATCTCTTGTAGCAGCATAACAACAACAGAGGTTGTGGATCAGCTTTCCAAGCTGGTTTGCAACTGTATGGGGGGTTCAGCTTCTGCTGGGGAGGATGAGTTTCTATCTTTTTGGAGGGATTGCAGCAATAATCTGAAAGATTGCTTAGGATCTGTTGTTTTTCCCATAGGTAGTCTATCTGTTGGTCTCTGCAGGCATCGCGCCATATTATTCAAAGTGCTAGCTGATGCTATTGATTTACCATGTCGAATTGCAAAGGGCTGTAAATATTGTAAAAGAGATGACGCTTCTTCTTGTCTTGTTCGATTTGGGCTTGACAGGGAATATCTTGTTGATTTAATTGGGAAGCCAGGACACTTATCCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTGTTCACCCTTGCGCTTTCCAAGACTTAAGCCAGCTGAAACTACAATTGATTTCAGGTCACTAGCCAAACAGTATTTCTCAGACTGTCTGTCTCTTGAGCTTTTCTTCGACAACAGTTCAGCAGAACAGTTGGATGGGAAATGCAATGAAAGTAATAACCTTAGGCCAATATCAAGTGACATCAACATAAATTCTCACCTTGCTTTGTATCCGCAAGCTCCTCTTCCGAGTACACTTGATCAAGCTTCTGAAACATATATGTTATGTAACCCTCCTCAGAACATTATAGAATCAACAACTGTGGGCAAGTATCCGCCGCCTTTAAAGCATAAGCGTCCTGTTGCTATTGCCAATGATGATGTCATCGAGGGTAGGAGGTTTATTGAAGGAAGTCAACTAATTCCTAGCAAGCCTACTCGAGAGGTTGCCTTTGACATGGAGGATTTGGCCATACCATGGAGTGATCTTGTTTTAAAAGAAAAAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCCGAGTGGAATGGTTCGGATGTTGCTGTTAAAATTTTGATGGAGCAAGATTTTCATGCAGAACGCTTCAAGGAATTCATGAGGGAGGTTGCAATAATGAAACATTTGCGGCATCCAAACATTGTTTTATTAATGGGGGCAGTCACTCAACCTCCTAACTTATCAATTGTCACCGAATATTTATCAAGGGGTAGCTTATACCGGCTGTTGCATAGACCTGGTGCCAAGGAAGTGTTGGATGAGAGGCGCAGGCTTAGTATGGCTTACGATGTGGCAAAAGGGATGAATTATCTTCACAAGCGTAATCCCCCCATTGTTCATAGAGACCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATACACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGCTTAAAGGCCAACACATTTCTCTCTTCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCAAATGAGAAGTCTGATATTTATAGCTTTGGGGTAATCATGTGGGAGATTGCAACATTGCAACAGCCATGGGGTAATTTGAATCCAGCACAGGTTGTCGCTGCCGTTGGCTTCAAGCATAAAAGGCTCGAGATCCCACGCAATTTGAATCCACAAATAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGTCCTTCTTTTGCCAGCATTATGGATTCTCTAAGGTCATTACTCAAACCCCCTACACCTCAACCTGGTCTTCCAAGCACGCCATGTCTCACCTGA 2490 0.4598 MEMPARRSNYSILSQVPDDQFSYAASASAPAPSSSSDGKASRGGWELVGDHRQGNNRIGNLNLYSSIGLQRQSSGSSYGESSLASGGDYYAQNLSAVAASEVDAFGYLHEVGEVRGKLAESAAWNGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDDAASRLSASAEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENSRIPSVDTLKSVHPRIDSSLDVVLVDRRSDASLRELQNMVHNISCSSITTTEVVDQLSKLVCNCMGGSASAGEDEFLSFWRDCSNNLKDCLGSVVFPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDASSCLVRFGLDREYLVDLIGKPGHLSEPDSLLNGPSSISFCSPLRFPRLKPAETTIDFRSLAKQYFSDCLSLELFFDNSSAEQLDGKCNESNNLRPISSDININSHLALYPQAPLPSTLDQASETYMLCNPPQNIIESTTVGKYPPPLKHKRPVAIANDDVIEGRRFIEGSQLIPSKPTREVAFDMEDLAIPWSDLVLKEKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFMREVAIMKHLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKEVLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGVIMWEIATLQQPWGNLNPAQVVAAVGFKHKRLEIPRNLNPQIAAIIEACWANEPWKRPSFASIMDSLRSLLKPPTPQPGLPSTPCLT* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2075 829 ProSiteProfiles Protein kinase domain profile. 555 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2075 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Mtr1g2075 829 PRINTS Tyrosine kinase catalytic domain signature 629 642 IPR001245 GO:0004672|GO:0006468
Mtr1g2075 829 PRINTS Tyrosine kinase catalytic domain signature 670 688 IPR001245 GO:0004672|GO:0006468
Mtr1g2075 829 PRINTS Tyrosine kinase catalytic domain signature 717 727 IPR001245 GO:0004672|GO:0006468
Mtr1g2075 829 PRINTS Tyrosine kinase catalytic domain signature 736 758 IPR001245 GO:0004672|GO:0006468
Mtr1g2075 829 PRINTS Tyrosine kinase catalytic domain signature 780 802 IPR001245 GO:0004672|GO:0006468
Mtr1g2075 829 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 121 817 - -
Mtr1g2075 829 ProSitePatterns Protein kinases ATP-binding region signature. 561 582 IPR017441 GO:0005524
Mtr1g2075 829 Pfam Ethylene-responsive protein kinase Le-CTR1 179 384 - -
Mtr1g2075 829 CDD STKc_MAP3K-like 561 809 - -
Mtr1g2075 829 SMART serkin_6 555 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2075 829 MobiDBLite consensus disorder prediction 23 40 - -
Mtr1g2075 829 Pfam Protein tyrosine and serine/threonine kinase 556 809 IPR001245 GO:0004672|GO:0006468
Mtr1g2075 829 SUPERFAMILY Protein kinase-like (PK-like) 532 808 IPR011009 -
Mtr1g2075 829 Gene3D Phosphorylase Kinase; domain 1 548 633 - -
Mtr1g2075 829 Gene3D Transferase(Phosphotransferase) domain 1 634 818 - -
Mtr1g2075 829 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 121 817 - -
Mtr1g2075 829 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2075 Mtr-Chr1 30645458 30655279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2075 1 820 MAP Kinase Kinase Kinase AT5G03730 64.437 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mtr1g2075 PK_Tyr_Ser-Thr 4.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2075 K14510 - gmx:100800648 1332.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2075 1 30645458 30655279 Mtr1g2075 1 30645458 30655279 ECH