Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2066 ATGAAGAAAAGAAGAGCTGGAAGGAAGAAGTTCCGCGAGACTCGACAACCAAACAACAAAACTCGTGTTTGGCTTGGAACATTTTCCCACCCCGACATGGCAGCTATAGCTTATGATGTTGCGCCTTTAGCTTTCAAAGGTGAAACTGCTTCCTTAATTTTCCCTCATGCGGCTACCTCGCTGCCGCGTCTTGATTCACAAACATCGTCTATTAGGTCTATTCAATTTGCTTCGACGAAAGCAGTTGAAAAACATTTGTCTTCTTGTCAAGACTTGGAATCATTCGTTGCTGATATTGCAATGAATGGTTCTGAGTCTGCGGATTATAACGTTAATGGTTGTGTGGAGAAGTTTTTGGAAGATTCTGACGGATTCTTTTGGGATGAGGAGGAGGTTTACAACATGCCGGGTTTGATAAATAGCATGGCAGAAGGGTTGATTATGACACCACCAGCGTTGCAGAGGGGGTTCAACTGGGTTGGCGGGGAAACTACAATGGACTTGAGTCTATGGGAAAATTGA 522 0.4406 MKKRRAGRKKFRETRQPNNKTRVWLGTFSHPDMAAIAYDVAPLAFKGETASLIFPHAATSLPRLDSQTSSIRSIQFASTKAVEKHLSSCQDLESFVADIAMNGSESADYNVNGCVEKFLEDSDGFFWDEEEVYNMPGLINSMAEGLIMTPPALQRGFNWVGGETTMDLSLWEN* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2066 173 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 8 172 - -
Mtr1g2066 173 ProSiteProfiles AP2/ERF domain profile. 1 55 IPR001471 GO:0003700|GO:0006355
Mtr1g2066 173 SUPERFAMILY DNA-binding domain 13 56 IPR016177 GO:0003677
Mtr1g2066 173 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 172 - -
Mtr1g2066 173 Gene3D AP2/ERF domain 2 57 IPR036955 GO:0003700|GO:0006355
Mtr1g2066 173 SMART rav1_2 3 61 IPR001471 GO:0003700|GO:0006355
Mtr1g2066 173 CDD AP2 13 57 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2066 Mtr-Chr1 30505438 30506131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2066 3 171 AP2-EREBP Transcription Factor Family AT4G25490 37.368 6.79e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2066 - - mtr:MTR_1g060910 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2066 1 30505438 30506131 Mtr1g2066 1 30505438 30506131 ECH
Mtr1g2066 1 30505438 30506131 Mtr7g3201 7 49014657 49015634 PCT