Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2065 ATGATGGCTGCTCAGAAGCACTTACATGAGCTACTCAAAGAAGATCAAGAACCATTTCTTCTAAACAATTACATTTCACACAAACGTAACCAAATAAAAAGATCTTCCTCATACACCACTTTACAATTGAAGAAACAAAAACCACCACCAACAAGAACAATTAACCTATGCAAAAATGCTTGTTTTTTCTCATTCCAAAACACACCAGATATAAGAAAATCACCACTTTTCGAACTCTCATCACCGGTGAAAAGTCCTCTTAGAATCCCTGCTAAAACAGCATCACTTTTACTTGAAGCAGCTCTAAAAATTCAGAGTAAAAAACCCAACAGCAAAAACAAATCCTTTGGTGTTTTTGGTTCGTTTTTCAAGAAACTAACACAAAGAAACAGAAGCAAAAAGAGTGAAAATGAAGAAAATGTTTCTGTTAAAGATATTTTGAGGTGGGATTCTTCTATAGGAAGAAGACATAGAAAATCCTTCAACAGCATAGTTGAAGAAGAAGAAAACAAAGGCTTTGAAGTGTGTTCTTGCAATGGAAGACCAAGTTGTAGTGGTGTTTGGTCTGAGAGTAATGAAGATAAATCTTTGGATATGGAAACTTCAAGTAGTGGTCATTCTTGTGAATCTGTTGAAGAGGTTGAGTTTGTGATGAGCAAGAAGAAAGAAAATGTAGATTGTGCTTGTTTTGATCCTCATGGATTTTTCTGTGAAAGCCCTTTTCGTTTTGCTCTTGAAAGGAGTGCCTCCTCTTCCTCCGGCCGTCGTACGCCGGAGTTTTCCTCGCCGGCAGAGTCACCTAGGCGCCCCCAAATAGAGGACAAAGAAAATAATGGAGTTGATGGCGTCAACAAATTCCAATCAGGGGAAGATGAGGATGAGAAGGAACAATTTAGTCCAGTATCTGTTTTAGATCCACTCTTTGAGGATTATGATGATGATGATGATTGCCATGAAAATGATGATGATGAGGGTGATTTTGATATGGAGTGTAGCTACGCCAATGTACAAAGAAGCAAGCAACTACTATTAGACAGGCTTCGTAGATTTGAGCAACTTGCAGAATTAGATCCACTAGAACTTGAGAAAAGAATGCAAGAAGACAACGAAGCATTCGAAGACGATGATTATGAAGAAGATGAAAGTGAAGCATCAAGTGAAGAGAAGGCATTGAGAGAAATAGTTCATGAAATCCTTTGCCATCCAAGTGTTCATGAAAGATGGCAAGACCAAAAAGTTTTCAAGAGACTAGTTTATGATCTCATTAAGGAGGAAGAGAAAGAACTTAATTTTTCACAAGATATGGACATTGTAATGAAAAGGGTATGCAAGAAAATGGAATTGTGGAAAGAAGTGGAATCTAACACTATTGATATGATGATAGAAGAGGATTTCTCTAGAGAGGAAATTGGGTGGAAGAAAAATGCTGAGGAAACAAAAGAGCTAGCTGGAGAGGTTGAACTTGCTATATTTTGTTTACTTGTTGATGAATTTTCAGAGGAATTAGTATGTTAA 1515 0.3716 MMAAQKHLHELLKEDQEPFLLNNYISHKRNQIKRSSSYTTLQLKKQKPPPTRTINLCKNACFFSFQNTPDIRKSPLFELSSPVKSPLRIPAKTASLLLEAALKIQSKKPNSKNKSFGVFGSFFKKLTQRNRSKKSENEENVSVKDILRWDSSIGRRHRKSFNSIVEEEENKGFEVCSCNGRPSCSGVWSESNEDKSLDMETSSSGHSCESVEEVEFVMSKKKENVDCACFDPHGFFCESPFRFALERSASSSSGRRTPEFSSPAESPRRPQIEDKENNGVDGVNKFQSGEDEDEKEQFSPVSVLDPLFEDYDDDDDCHENDDDEGDFDMECSYANVQRSKQLLLDRLRRFEQLAELDPLELEKRMQEDNEAFEDDDYEEDESEASSEEKALREIVHEILCHPSVHERWQDQKVFKRLVYDLIKEEEKELNFSQDMDIVMKRVCKKMELWKEVESNTIDMMIEEDFSREEIGWKKNAEETKELAGEVELAIFCLLVDEFSEELVC* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2065 504 MobiDBLite consensus disorder prediction 268 299 - -
Mtr1g2065 504 MobiDBLite consensus disorder prediction 364 385 - -
Mtr1g2065 504 PANTHER OS04G0572500 PROTEIN 4 504 - -
Mtr1g2065 504 PANTHER - 4 504 - -
Mtr1g2065 504 MobiDBLite consensus disorder prediction 184 204 - -
Mtr1g2065 504 MobiDBLite consensus disorder prediction 248 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2065 Mtr-Chr1 30490853 30495972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2065 2 335 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 40.650 1.65e-48 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2065 - - gmx:100814311 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2065 1 30490853 30495972 Mtr1g2065 1 30490853 30495972 ECH
Mtr7g3203 7 49040557 49044168 Mtr1g2065 1 30490853 30495972 PCT