Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2060 ATGGGCTCATATTCGGGAACTTGTGAAATTGTTGAAGCGAGGGATGACGTAAGTACAGTGAAAGATGCAAGGATATATCCGTCCAGTTCTGGATATAGTGTAGCTGAGAAAAATCAGAAGCTTCCTTCGCTGAAACTGGGATACAAGGATAATCTCGATGATGATATTAATAAGCTGTTTGAAACAATTTCTCTGAGATCTTCGTCAAGGGATTTGAGCTATCTACCAGATGGAACAAGTCCAAAGTTGAAAAGCGCGTTAAAAAAGCCAATGACAATGGGTGTACCTCGATCTCCACGAGTTGGGATTTCTGAGCCGGTGACTTTGAAACAGGCATTAAGAGACCTTTGTATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCAGGAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTTGTCACTGATGCTAGGAGATCAGGGCCTTCTAACGTTGACAGTAGTAAAAGGAGTTCAACTGAAATATCTCCGGTGCTGGAAGAAAGCAAGTCGCTTGGCTTGAATAAAGAATCACAGTCTCTTCAAACTTCCGAAAGTGTATTGAGCCAAAATGTTCAGTCTTCTGAAATTCCAGTTGCAACTGCAGAAAATGATACAGGGGCTTCATTGATGCGAAGTGATTTGGAATGTTCATCAAGTAAAGTTGGGGTTTCATCCCAATCATCAGAACCTATTCAAATGGAAAAACAAATGTCTGCTTCTTCTCCACCTTGTTGTAACACCAATGGAAGTAAAGTAGAGTTGCCTGAAAAAGATTCTTCCCCTAAAAAATTAGGAAATAAAGCATCTATACGGAAAGGTATATTGCAAACAACATCTTCCTCATCTACTTCAATAAATGGCAATAGAGTGTGTAAACTTTCGCGCCACAGCCCCCGAGCAGTAAAATCGATCATAAAAAACAAGAGTTTGGGTAAGAAGAAACCAAAGCAGGTTTCTGATTCTGGTTTACATGTTTCTCCGTCAAATGAAGCAAATAACAAGTCAGTTCCCGCCACAACTCCACTTGTTTGTGAGAGATGTTGGTGTGAAATAGAAAACAGCAAAGGTAATATAACACCGGGACCTGCAGATGGAATAAACTTGAAGAGCATGCTCTCTGGGCCAGCACCAACTAGTTGTAACAACAGCGGAGAAGTTGCAAAAGTGAAAAAGAATGGCAGATTGAAAGAGCAGCTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGCAGTAGTACAAGTACCAGCGACGAGAGTAATGTCAGTGGTTCTAGTTTTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGAGTATTAGGCTTGAGAAACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACCGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCACAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACACTTTATGCACAGTTTACATCAGAAAATCTGTCATGTCTTGTCATGGAGTATTGTCCCGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGCAGATGTTTTTCAGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTCGGAGTTGTTTACCGTGATCTGAAACCAGAGAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACTGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCAACACTTCTGAAATCATCTTCTGATATAGATCCTGCCAAGGTTTCTGGTACATGTGCAAAGTCAAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTTCATGCTTCAGTCCTAGATTCTTACCACCTGGGGCGAAAGCAAGGAAACTCAAAGCTGATCTTGCTGCTCATATCAGATCATTGCCACAGCTTGTGGCAGAGCCCACGGATGCAAGATCAAACTCATTTGTTGGTACTCATGAATACCTAGCTCCCGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACTTTTGGTGTTTTTCTGTACGAGCTTTTATATGGTAGAACACCCTTCAAAGGTTCTAATAATGAAGAAACATTAGCCAATGTCGTGTTGCAAAATCTCAGATTCCCTGATAGCCCATTTGTTAGTTTCCAAGCAAGGGATCTTATCAAAGGGTTGTTAGTTAAAGAGCCTGAAAATCGATTGGGTACAGAGAAAGGGGCTGCAGAGATTAAACAACATCCGTTCTTCGAGGGGCTTAATTGGGCTTTAATACGTTGTGCTATTCCACCAGAACTTCCAGACCTTTGTGAATTCGAGTTGGGAGTTTCAGACATGATCGCACAGTCACAAAGCAAGGGTGGTAAATATTTAGAGTGTACAACAACAGGTGGACAAGTGGAATTTGAGTTGTTTTAG 2580 0.4151 MGSYSGTCEIVEARDDVSTVKDARIYPSSSGYSVAEKNQKLPSLKLGYKDNLDDDINKLFETISLRSSSRDLSYLPDGTSPKLKSALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSGASPRISEAGKIQTLYNSVVTDARRSGPSNVDSSKRSSTEISPVLEESKSLGLNKESQSLQTSESVLSQNVQSSEIPVATAENDTGASLMRSDLECSSSKVGVSSQSSEPIQMEKQMSASSPPCCNTNGSKVELPEKDSSPKKLGNKASIRKGILQTTSSSSTSINGNRVCKLSRHSPRAVKSIIKNKSLGKKKPKQVSDSGLHVSPSNEANNKSVPATTPLVCERCWCEIENSKGNITPGPADGINLKSMLSGPAPTSCNNSGEVAKVKKNGRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSSFGNRPHMSKDFRWQAIRDAQMQHGVLGLRNFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDIDPAKVSGTCAKSSCIEPFCIEPSCQVSCFSPRFLPPGAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMIAQSQSKGGKYLECTTTGGQVEFELF* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2060 859 MobiDBLite consensus disorder prediction 284 304 - -
Mtr1g2060 859 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 859 - -
Mtr1g2060 859 Pfam Protein kinase domain 701 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2060 859 Pfam Protein kinase domain 473 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2060 859 Gene3D Transferase(Phosphotransferase) domain 1 697 819 - -
Mtr1g2060 859 SUPERFAMILY Protein kinase-like (PK-like) 448 821 IPR011009 -
Mtr1g2060 859 MobiDBLite consensus disorder prediction 411 445 - -
Mtr1g2060 859 MobiDBLite consensus disorder prediction 308 325 - -
Mtr1g2060 859 MobiDBLite consensus disorder prediction 381 446 - -
Mtr1g2060 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Mtr1g2060 859 MobiDBLite consensus disorder prediction 385 399 - -
Mtr1g2060 859 Gene3D Phosphorylase Kinase; domain 1 470 551 - -
Mtr1g2060 859 MobiDBLite consensus disorder prediction 231 349 - -
Mtr1g2060 859 ProSiteProfiles Protein kinase domain profile. 472 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2060 859 MobiDBLite consensus disorder prediction 154 194 - -
Mtr1g2060 859 CDD STKc_phototropin_like 472 823 - -
Mtr1g2060 859 Gene3D Transferase(Phosphotransferase) domain 1 552 620 - -
Mtr1g2060 859 SMART serkin_6 472 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2060 859 MobiDBLite consensus disorder prediction 231 267 - -
Mtr1g2060 859 PANTHER FLIPPASE KINASE 1-RELATED 1 859 - -
Mtr1g2060 859 MobiDBLite consensus disorder prediction 334 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2060 Mtr-Chr1 30447797 30453036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2060 1 859 AGC Kinase Gene Family AT3G52890 53.216 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr1g2060 Pkinase 2.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2060 - K08286 gmx:100813470 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3212 7 49217532 49222333 Mtr1g2060 1 30447797 30453036 ECH
Mtr1g2060 1 30447797 30453036 Mtr1g2060 1 30447797 30453036 ECH
Mtr7g3022 7 47107396 47108890 Mtr1g2060 1 30447797 30453036 PCT
Mtr7g3212 7 49217532 49222333 Mtr1g2060 1 30447797 30453036 PCT