Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2051 ATGGATCAACTTGATCAACCTTTAGTTTCTAATAGCTCTCTAGTTTTTCCACTCATGATCACCTTAATATTATTAATTTTTTTCACTACTATTTTTTCATATCTCATATCATGTTTTCACAAATTTTTTAGTAGTAGTGTGTTTTGTAGTTGTGAAATTTGCCAAGCTTATCTCTCTTCAAGTTGGTCAAAAGATTTCAACAATCTTTGTGATTGGTATGCTCATCTCCTAAAAAAATCACCAACAAAAACCATCCACATACATGTCCTAAGAAACATAATCACCGCAAATTGTGAAAACGTTGAGTACATACTCAAAACAAAATTCGAAAACTACCCAAAAGGAAAACCCTTCTCATCAATCTTAGGTGATTTTCTAGGTCGTGGTATCTTCAACGTGGATGGTGATTTATGGAAATTTCAAAAGAAGATGGCAAGTTTAGAACTCAACAAACAATCCATAAGATCATTTGCCTTTGAAGTTGTCAACAACGAAATCGAAAATCGACTCATCCCTCTACTCCAAAACCAAAACCTAAACCAAGTTGTTTTTGATTTGCAAGATGTTTTCAAAAGATTCTCTTTTGATAGTATTTGTAGATTTTCCTTTGGTTTAGACCCTATGTGTTTAGAAACATCCTTACCTATGTCGGATTTCGCTCTTTCTTTTGATCTAGCATCAAAATTATCAGCTGAAAGAGCCATGGTTGTGTCTCCATTAATTTGGAAGATCAAAAGATTTTTCAACATGGGTAGTGAAAAGGAGTTACAAAAAAGTATTAACATCATTAATATGTTAGCCAAAGTTGTTATAAATCAAAAGAGAAAATTAGGTTTTTCCCATCACAAAGATTTGTTGTCAAGATTCATGAGTACTACAATTCATGATGACATGTTTCTTAGAGACATAGTCATAAGTTTCTTATTGGCCGGTCGCGACACCGTGGCATCATCACTCACAAGTTTCTTTTGGTTATTAGCAAAAAATCCAGAAGTTGAGAAAGAGATTTTGTTAGAAGCAGAAAGAGTAATTGGACCACATGATGAAAACAATATTTTTGGTGTAACGAATTTTGAACAACTTAGGAAATTGCATTATTTACAAGCAGCAGCACATGAAAGTATGAGACTATATCCACCAATTCAATTTGATTCAAAGTTTTGTTTGGATGATGATGTTTTACCAGATGGTACAAAAGTGAAAAGTGGAACTAGGGTTACTTATCATCCTTATGCAATGGGTAGGTTGGAGGAATTGTGGGGTCCAGATTGTTTAGAGTTTAAGCCTGAAAGGTGGTTGAAAGATGGTGTGTTTCAACCTTCAAATCAATTCAAGTACCCTATTTTTCAAGCTGGGTTAAGGGTTTGTATTGGTAAAGAAATGGCTTTGATGGAACTTAAAAGTGTGGCAATTTCTTTGCTTAGAAAGTTTCATATTGAATTGGAAGATAGAACAATGTTTCATGGTAACCCAAGATTCTCTCCTGGACTAACTGCCACTTTTGCTTTTGGTCTTCCTGTATTTGTTCGTCCAAGAGGAACCAAGTGA 1548 0.3424 MDQLDQPLVSNSSLVFPLMITLILLIFFTTIFSYLISCFHKFFSSSVFCSCEICQAYLSSSWSKDFNNLCDWYAHLLKKSPTKTIHIHVLRNIITANCENVEYILKTKFENYPKGKPFSSILGDFLGRGIFNVDGDLWKFQKKMASLELNKQSIRSFAFEVVNNEIENRLIPLLQNQNLNQVVFDLQDVFKRFSFDSICRFSFGLDPMCLETSLPMSDFALSFDLASKLSAERAMVVSPLIWKIKRFFNMGSEKELQKSINIINMLAKVVINQKRKLGFSHHKDLLSRFMSTTIHDDMFLRDIVISFLLAGRDTVASSLTSFFWLLAKNPEVEKEILLEAERVIGPHDENNIFGVTNFEQLRKLHYLQAAAHESMRLYPPIQFDSKFCLDDDVLPDGTKVKSGTRVTYHPYAMGRLEELWGPDCLEFKPERWLKDGVFQPSNQFKYPIFQAGLRVCIGKEMALMELKSVAISLLRKFHIELEDRTMFHGNPRFSPGLTATFAFGLPVFVRPRGTK* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2051 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 Gene3D Cytochrome P450 52 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 SUPERFAMILY Cytochrome P450 67 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2051 515 PANTHER CYTOCHROME P450 34 506 - -
Mtr1g2051 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 34 506 - -
Mtr1g2051 515 Pfam Cytochrome P450 84 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2051 Mtr-Chr1 30314582 30316587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2051 42 512 Cytochrome P450 AT2G27690 58.017 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2051 K20624 - gmx:102662117 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2051 1 30314582 30316587 Mtr1g2051 1 30314582 30316587 ECH