Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2050 ATGGACTCACAAAAGCACCTTTTCATCCTCTCATGTCTTTCCCTATTACTTGTACTTCTCTCAGGACAAATGGAGATGCAAGTTGAGGCCACTCGCCATCTCAATCATCCTTCAAAAAAATTGTTTGTTTTTGGAGATTCGTATGTTGATACCGGCAACTCCATAAAAACCATATTTGATTCATGGAAAGTACCTTATGGTATAACCTTTCCCGGAAAACCAGTTGGGAGATTCTCCGACGGTAGAGTTTTAACCGACTTCCTTGCCAAGTATTTGGGATTGAAATCACCAATCACTCACAATTTATGGAATACTAATACAGTGCCTAAGCATGATTTGAAGTATGGGATGAACTTTGCCTATGGTGGTACAGGTGTATTTGAAATATCTTCTACAGGACCAAATGTGACAACACAAATCAATTCCTTAATCAAACTCATTCAAGAAAATGTATACACTCCCTCAGATATCACCAAATCTATAGCTTATGTCTCTGTTGCTGGAAATGACTACAATTATTATTTGAAAACAGGAGGAGCTTTCCTGGGTTTCCCATCTTTCCCATCTTTCATTGAATCAGTGATTGAACAAACAACCACCAATTTGATTCATCTTCAAAGCTTAGGATTTGAGAGAATTGTTGTGGGTGCTTTACAACCCCTTGGTTGTCTTCCTCAAGCAACTGCTGAAACCTCATTCCAAAGTTGCAATAGTACATTTAACGACCTCGTAGCTCTCCACAATAACCTATTGAACCAATCTGTTACAAAGTTAAATCAAGAAACCAATGATCACACCACATTCACAATTCTAGACATTTTCGATAGTTTCAAGTCAGTGTTGAATCACCCTTCTAGCCATAACATTAAGGAACGTTTGAAACCATGTTGCGTCGGAGTAAGCAGTGAGTATAAGTGTGGAAGTGTAGATTATAAAAATTTAAATAAGGTTAAGAAATATTTGGTTTGTGAAAATCCTGAATCAACTTTCTTTTGGGATCAGTTGCACCCAACACAGGCCGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAAAGATCTTTATCAAGTTTTGTATTAG 1080 0.3759 MDSQKHLFILSCLSLLLVLLSGQMEMQVEATRHLNHPSKKLFVFGDSYVDTGNSIKTIFDSWKVPYGITFPGKPVGRFSDGRVLTDFLAKYLGLKSPITHNLWNTNTVPKHDLKYGMNFAYGGTGVFEISSTGPNVTTQINSLIKLIQENVYTPSDITKSIAYVSVAGNDYNYYLKTGGAFLGFPSFPSFIESVIEQTTTNLIHLQSLGFERIVVGALQPLGCLPQATAETSFQSCNSTFNDLVALHNNLLNQSVTKLNQETNDHTTFTILDIFDSFKSVLNHPSSHNIKERLKPCCVGVSSEYKCGSVDYKNLNKVKKYLVCENPESTFFWDQLHPTQAGWNAVYNELEKKDLYQVLY* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2050 359 Gene3D SGNH hydrolase 29 352 IPR036514 -
Mtr1g2050 359 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 357 - -
Mtr1g2050 359 PANTHER OSJNBB0059K02.9 PROTEIN 7 357 - -
Mtr1g2050 359 Pfam GDSL-like Lipase/Acylhydrolase 41 347 IPR001087 GO:0016788
Mtr1g2050 359 SUPERFAMILY SGNH hydrolase 38 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2050 Mtr-Chr1 30294170 30297086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2050 41 340 Acyl Lipid Metabolism Gene Families AT4G10950 28.076 1.03e-27 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4355 1 55261885 55268286 Mtr1g2050 1 30294170 30297086 ECH
Mtr1g2050 1 30294170 30297086 Mtr1g2050 1 30294170 30297086 ECH
Mtr7g3215 7 49242977 49247996 Mtr1g2050 1 30294170 30297086 PCT