Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2049 ATGGATTCACACAAGCAACTATTCATCCTTCTATGGCTTTCGCTAGTACTTGTACTTCTCTCAGGACTGCAAGCTGAGGCCAGTCGTCACCTAAAATATCCAACAAAAGAATTGTTCGTTTTCGGAGACTCGTATGTTGATACCGGCAACAGCCAAAAAAGTAAACCTGGTTCATGGAAAGAACCTTATGGCATAACCTTTCCCGGAAAACCTGCAGGAAGATTCTCGGACGGTAGAGTTTTAACTGACTTCATTGCCAAGTATTTGAGATTGAGATCACCAATCCCTCACAAATTCAGGAACATTGTGTCTAAACATTATTTGAAGTATGGGATGAACTTTGCATATGGTGGCACAGGTGTATTTGATACATTTACTTCAGGACCAAATATGACAGCCCAAATCGATTCCTTCAACCAACTCATTCAAGAAAATGTCTATACTCCTTCAGATCTCAGCAAAGCTATTGCTTATGTCTCAGTTGCTGGAAATGACTACAATCATTACTTGGCCACAAATGGCTCTCTTCCGGGTTTTCCATCTTTCATTGCTTCAGTGGTTAAACAAACAACCACCGATTTGATTCATCTCCAAAGCTTAGGGTTTAAGAGAATTGTTGTAGGTGCTTTACAACCACTTGGATGTCTTCCTCAAACCACTGCTGAATCCTCGTTCCAACGTTGCAATAGTACATTTAACGACCTCGTAGCTCTCCATAACAACCTATTGAACCAATCCGTGGCCAAATTGAACCAAGAAACCAAGGATCACACCACCTTTACAATTCTAGACATTTTTGACAGTTTTGCGTCGGTGTTGAACCACCCTGCAAGCCATAATATCAAGGATCATTTGAAGCCATGTTGCGCGGGAGTAAGCAGTCAGTATAATTGTGGAAGTGTAGACGAGAATAATGTTAAGAAATATTTGGTTTGTGAAAATCCAGAATCAAGTTTCTTTTGGGATGGATTGCACCCAACACAAGCTGGATGGAATGCTGTATATAATGAGTTGGAGAAGAAAGGTCTTCACAATATTTTGTACTAG 1047 0.405 MDSHKQLFILLWLSLVLVLLSGLQAEASRHLKYPTKELFVFGDSYVDTGNSQKSKPGSWKEPYGITFPGKPAGRFSDGRVLTDFIAKYLRLRSPIPHKFRNIVSKHYLKYGMNFAYGGTGVFDTFTSGPNMTAQIDSFNQLIQENVYTPSDLSKAIAYVSVAGNDYNHYLATNGSLPGFPSFIASVVKQTTTDLIHLQSLGFKRIVVGALQPLGCLPQTTAESSFQRCNSTFNDLVALHNNLLNQSVAKLNQETKDHTTFTILDIFDSFASVLNHPASHNIKDHLKPCCAGVSSQYNCGSVDENNVKKYLVCENPESSFFWDGLHPTQAGWNAVYNELEKKGLHNILY* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2049 348 CDD SGNH_plant_lipase_like 38 338 IPR035669 -
Mtr1g2049 348 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 341 - -
Mtr1g2049 348 PANTHER OSJNBB0059K02.9 PROTEIN 1 341 - -
Mtr1g2049 348 SUPERFAMILY SGNH hydrolase 36 339 - -
Mtr1g2049 348 Pfam GDSL-like Lipase/Acylhydrolase 38 336 IPR001087 GO:0016788
Mtr1g2049 348 Gene3D SGNH hydrolase 27 341 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2049 Mtr-Chr1 30287552 30290962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2049 6 334 Pollen Coat Proteome AT1G75930 25.429 6.82e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2049 - - gmx:100789208 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2049 1 30287552 30290962 Mtr1g2049 1 30287552 30290962 ECH