Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2047 ATGGAGTGCAACAAGGATGAGGCTGTAAGGGCTAAACAACTGGCGGAAACTAAAATGCAAAGGGGTGAATTCGTAGATGCACTGAAGTTTGCTAAAAAGGCCAAAAATCTGTATGCTGGTGTGGAAAACATTGCTCAGGTCCTTGCAGTTTGTGAGGTTCACATTGCTGCACTGAAGAAACTCTCTATGTTTGAAATGGACTATTATGAAATTCTTCAGACACATAGATTCTCCGAGGAAGCAATCATAAAGACGCAGTACAGAAAGCTCGCACTGCTACTTCATCCTGATAAAAATAAATTTTCTGGTGCTGAAGCTGCTTTCAAGTTGATTGGAGAAGCCAATAGGGTTTTGAGTGACCAAGCACAACGATCTTTATATGACAAAAAGGTCAAAGTTCATGTGAGATCTGCAGCAAATCAAGTTCCAAATACAACAAAATACTGGAAAAAAGTTTTTTCAAACTTCCCTTCTTGGAATCCCCATCTCAAAGCTGCAAAACAGACATTCTGGACAGTTTGCCAACATTGTAATAGCAGGTTCCAGTACTACACAAATATTATGATTACTGCCTGTCAAAAATGTATTAGTCAACTTGCTGCCCCATCATTTGTACGGTTTCGTGCCCGGAAAAATGCTCCCATGCAGGCTCCACCAAAAGCGGCCTCCAAAAGTAATGGTGGAAAACCCCTTGGTGGTAGATATGCAGATGCTTTTGTGCAGTCATATCCTTCATGTATGAAAACCTCTGCCGCTGGGGTTGGTAAGCAACTTAATGATGAAAAGAGTAAGTATGGCTATGTTCCCCTGTCCAAACCAATGGAGTCACAGGCCTCAAAAAGTGTTGGAAATAAGAGAGTGAGAGAACCTGAACCAGATTCAAAAGACAGATTCAACACTGGAATTGATGATGAAAAGAAAGATGTCAATGTTCGAGAAAGTTATGTTGATCCTTCAAGATTGAATGTTAGGTCGTCTTCCAGACAAAAGCAGCACGTTTCGTATGTGGAAACCAATGAAGATGACAATTATGATATTCATCCCAAAAAGCCACGACGAGATGAATCATTGAACATTGATGAAGTTGAGAAAAAGAACGTGTCTGAAGAAACATTTTTAAGGAATACAAGCAAAGATGGGCACTCTCATGTTCAAGGTGGTAAGGAATTGGAGTCAGATCTTGATCCTAGAATGTTAAATGAGGAAAACTGTTCTCCACCGAATTCAAATATCCCGTCTAGTCCAGAGATCATTCATTGTCCTGATCCAGATTTCAATAATTTTGAGAAGGACAAGGCAGATGATTGTTTTGCTGTTAATCAATTATGGGCAATTTATGATAACACTGATGATGTTATGCCAAGACTTTATGCTCTTGTCAAGAAAGTGACCTTCCCTTTCAAGTTGCAGATTACTTGGTTGGAAGCTTACCCAGATGAGGATGGCGAGGTTGATTGGTATAATGCAGATTTGCCTATTGCTTGTGGTAAATTCAAAATTGCTAACTCTCAGAAAACTACAGATCGTGATATTTTCTCTCATCAGATTCAGTATATCAAAGGAAATAACAGAGGCTCTTACCTAGTGTTTCCCAAGAAGGGAGAAACTTGGGCAATTTTCAGAAATTGGGATATCAAGTGGAGTTCTAATCCAGAATATTATCGGAAGCGTGAATTTGCTTTTGTTGAAATCCTATCAGATTTTGCTGAAAATTTTGGCATTGAAATAGCTTACTTAGGAAAGGTGAAAGGATTTACTAGCCTCTTTGAGAAAACTCAAAATAATGGAGAGAACATGTTTTGTATTCCACTGAATGAGCTATATAGGTTCTCACATCAAATCCCTTCATATAAGATGAGTGGTGATGAGAGGGAAGGTGTTCCGAGAGATTGTTTTGAACTTGACCCCGCTGCCCTGCCAACTTACATATTTGAAGCTGAAAAGGACTCATCAATCTTTGGAAGATCAAGGGAAGACGTGTCAATGGCATGTTAG 1995 0.394 MECNKDEAVRAKQLAETKMQRGEFVDALKFAKKAKNLYAGVENIAQVLAVCEVHIAALKKLSMFEMDYYEILQTHRFSEEAIIKTQYRKLALLLHPDKNKFSGAEAAFKLIGEANRVLSDQAQRSLYDKKVKVHVRSAANQVPNTTKYWKKVFSNFPSWNPHLKAAKQTFWTVCQHCNSRFQYYTNIMITACQKCISQLAAPSFVRFRARKNAPMQAPPKAASKSNGGKPLGGRYADAFVQSYPSCMKTSAAGVGKQLNDEKSKYGYVPLSKPMESQASKSVGNKRVREPEPDSKDRFNTGIDDEKKDVNVRESYVDPSRLNVRSSSRQKQHVSYVETNEDDNYDIHPKKPRRDESLNIDEVEKKNVSEETFLRNTSKDGHSHVQGGKELESDLDPRMLNEENCSPPNSNIPSSPEIIHCPDPDFNNFEKDKADDCFAVNQLWAIYDNTDDVMPRLYALVKKVTFPFKLQITWLEAYPDEDGEVDWYNADLPIACGKFKIANSQKTTDRDIFSHQIQYIKGNNRGSYLVFPKKGETWAIFRNWDIKWSSNPEYYRKREFAFVEILSDFAENFGIEIAYLGKVKGFTSLFEKTQNNGENMFCIPLNELYRFSHQIPSYKMSGDEREGVPRDCFELDPAALPTYIFEAEKDSSIFGRSREDVSMAC* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2047 664 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 660 - -
Mtr1g2047 664 MobiDBLite consensus disorder prediction 334 358 - -
Mtr1g2047 664 MobiDBLite consensus disorder prediction 267 358 - -
Mtr1g2047 664 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Mtr1g2047 664 MobiDBLite consensus disorder prediction 319 333 - -
Mtr1g2047 664 CDD DnaJ 67 120 IPR001623 -
Mtr1g2047 664 PANTHER - 1 660 - -
Mtr1g2047 664 Gene3D DnaJ domain 64 171 IPR036869 -
Mtr1g2047 664 SMART dnaj_3 66 123 IPR001623 -
Mtr1g2047 664 Pfam Domain of unknown function (DUF3444) 415 623 IPR024593 -
Mtr1g2047 664 SUPERFAMILY Chaperone J-domain 58 132 IPR036869 -
Mtr1g2047 664 PRINTS DnaJ domain signature 69 87 IPR001623 -
Mtr1g2047 664 PRINTS DnaJ domain signature 87 102 IPR001623 -
Mtr1g2047 664 PRINTS DnaJ domain signature 103 123 IPR001623 -
Mtr1g2047 664 Pfam DnaJ domain 67 128 IPR001623 -
Mtr1g2047 664 MobiDBLite consensus disorder prediction 282 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2047 Mtr-Chr1 30252127 30256807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2047 4 204 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.057 8.96e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2047 - - mtr:MTR_1g060440 1347.8