Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2045 ATGGCAGAAGAACAACCATGCCAAGCACCTGAAGGCCACCGTCTCTGCACAAACAACTGTGGCTTCCTCGGTAATCCAGCCACCATGAATCTCTGTTCAAAATGTTACGGGGATGCTTCCACCAAATCCACCATAGAAAACACTCTCTCATCATCTTCATCCGTCACCGCATCCCCCGCTTCACCGTCACATTCCACATCGGAGCCGATCGTTCAATTCATCAATCCAATGGTTACGTCAAGTGTTGTAATTACCAATTCTGTTTCTTTTTTGGTTCAATCGAACCGGTGCTTTACCTGTAGAAAGCGCGTGGGGCTGACCGGGTTTAAGTGTAGATGTGGGTCCACGTTTTGTGGGTCCCACAGGTACCCGGAGAGACATGGTTGTGGATTTGATTTTAAGATGGTGGGGAGAAAGGAAATAGCTCAAGCAAATCCTTTGATTAAAGCGGAAAAGTTGAGGAGGATTTGA 471 0.4713 MAEEQPCQAPEGHRLCTNNCGFLGNPATMNLCSKCYGDASTKSTIENTLSSSSSVTASPASPSHSTSEPIVQFINPMVTSSVVITNSVSFLVQSNRCFTCRKRVGLTGFKCRCGSTFCGSHRYPERHGCGFDFKMVGRKEIAQANPLIKAEKLRRI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2045 156 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Mtr1g2045 156 SMART AN1_Zf_4 97 134 IPR000058 GO:0008270
Mtr1g2045 156 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Mtr1g2045 156 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Mtr1g2045 156 Gene3D - 78 152 IPR035896 -
Mtr1g2045 156 ProSiteProfiles Zinc finger AN1-type profile. 91 137 IPR000058 GO:0008270
Mtr1g2045 156 SUPERFAMILY AN1-like Zinc finger 92 151 IPR035896 -
Mtr1g2045 156 Gene3D - 1 69 - -
Mtr1g2045 156 PANTHER BNAC06G14100D PROTEIN 1 156 - -
Mtr1g2045 156 Pfam AN1-like Zinc finger 97 133 IPR000058 GO:0008270
Mtr1g2045 156 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 156 - -
Mtr1g2045 156 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2045 Mtr-Chr1 30230493 30231513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2045 1 156 C2H2 Transcription Factor Family AT3G52800 52.941 3.69e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2045 - - gmx:100527251 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2045 1 30230493 30231513 Mtr1g2045 1 30230493 30231513 ECH
Mtr7g3219 7 49290939 49292173 Mtr1g2045 1 30230493 30231513 PCT