Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2034 ATGATTCATTTAGTTACCTCAATGAAAGAAGAATACGAATATGAGTTTATTAAGAAGATAGTTACAGTGATTTCAAACAAGATCAACCGTGTTCTTTTACATGTTGCCGATCACCCCGTTGGGCTCGAGTCTCGACTGCTGCAAGTAAAGTCACTTCTAGATGTTGACTGTGATAATGGAGTCGGTCTGATTGGGATATATGGAAGTGGAGGATTAGGTAAAACAACACTTACTCGAGCAGTTTATAATTTGATTGCGGATCAATTTGAAGGATTGTGCTTCCTTCACAATGTGCGAGAAAATTCAGTTAAATATGGCTTAGAATATCTCCAAGAGCAGCTCCTCTCCAAATCAATCGGATTGGAGATTAAGTTAGGACATGTTAGTAAAGGAATTCCAATCATAAAAGAAAGGCTACATCAAAAGAAAATTTTGTTGATTCTCGATGACGTTGACAAGCTAAAGCAGTTGCAGGTTTTGGTTGGAGAGCCTAGTTGGCTTGGTCCTGGGAGTAGAGTCATCATTACCACCCGAGACAAACATTTGCTATCATGTCATGGGATTAAAAGAATATATGAAGTCGATTTCTTAAATAAGGATGAAGCTCTTGAATTGTTTAGGTGGATGGCTTTTAAAAGTAACCACAATGACTCAAGTTATGATTATATTTTAAACAGTGCAGTTAAATATGCTTCTGGCCTTCCGTTAGCTTTAGAAGTAGTGGGTTCCAGCTTGTTTGGAAAGTGTACAACAGAATGGGAATCTACATTACAGAAGTATGAAAGGATTCCACATGAAGATATCCAAAACATACTTAGAGTAAGCTATGATGCTTTGGACGAAGAACAACAAAGTGTATTTTTGGATATTGCTTGTTGCTTCAAAGGGTGTAAATTGACAGAAGTCCAAAAGATACTTCATGCTCGTTATGACCATTGCATAAAAAGTCATGTTGGAGTGTTGGTTGATAAAGCTCTCATGAAGATTAATTTTTATGGTTTTGTGGCATTACATGACTTGATAGAGGATATGGGTAAAGAAATTGTCCGACAAGAATCACCCAAAGAACCTGGAAAACGCAGTAGGTTGTGGTTTCATGAAGATATAGTTCATGGAACTAGGAAAATCGAAATCATACGTTTGAGTTCCCTGTCAACCGAAGAAACAATAGATTGGAATGGAAAGGCATTTCAAAAAATGAAAGGTCTCAAAGCACTTATCATTGAAAATGGTCATTTTTCTAAAGCTGCAAGATACCTCCCAAGTAGTTTGAGATTATTGAAATGGAATAGATGTCCTTCGAAGTCTCTCTCGTCTATTTTTTTGAACAAGAAGTTCGAGTATATGAAAGTTTTGAGCTTTAACGATTGTCAATATTTAACTGATCTACCCGATGTCTCAGGTCTTCAAAATTTAGAAAAGTTCTCATTTGAAAATTGTAACAATTTAATTACAATTCACAATTCAATTGGGTTCCTAAATAAACTTGAAACCTTAAATGCAAAGGGTTGCATCAAGCTCGAGAGTTTTCCACCCTTACAGTTGACCTCTCTTAAGAAATTGGAACTCTCTATTTGTAAGAGTCTCAAGAGTTTTCCAGAATTAGTTGGTAGGTTGACAAATATAAAAGACATTTGGTTGTATGGAACCTCCATAGGAGAATTGCCATTTTCATTTCAAAATTTCAGTGAACTTGCTCACTTATATCTAAGTGGATGTGGAAAGCTCAGATTTTCAAGTTTCATTTTTATGATGCCAAAGTTGTCAAAGATTACCGCTAAGGATTGTCGTCTAGTCTTGCCAAAACTTAATGATAAATTGAATTCCACACTGTTTTCAAATGTGGAATATCTTAATCTTGGAAACAACAGCCTCTCAGATGAATGTGTTCCAATAATTCTCAGGTTGTGTGCTAATGTGAAGTATCTATACTTACCGGGTAATGATTTTAAAATTCTTCCTGAGTGCCTTAATGAATGTCACCTTATTAGAATCCTTGAATTGGATGGCTGCAAAAACCTTGAGGAAATTAAAGGGATTCCACCAAATCTAAAAAAGTTTTCTGCAATACAATGCAAGTCATTGACTTCCTCATGTATAAGGATGTTATTGAGTCAGCAACTACACGAAGCTGGATGCACTGATATTTGTTTGCCAACTAGAATTAAGAGGATTCCAGATTGGTTCGAGCACCAATCCGGGGGGCAGACAATTTCTTTCTGGTTTTGTAAAAAAATCCCTTCTATAAGTTCTATTTTTCTCTTCTCTTTTCCTGAATCATTTTCTGTTCATGTGAGGGATAATATTACAATAATAGTCAACTTGTTCGTCAATGGCTATAAATACACTCTTTCTGACGATGTCTGGTTTGTTTCTCGTTGTCCTAAGATACAAACGGATCATACATATCTGTTTGATCTGGAATTGGAAGAACTGATTAAGCGCTACAGGACGTACAGGAAACTCATGTCTAAACTGGAGGAAGCACTTTTAAAAAATGAATGGATCCATGTAGAGCTTAAGTTTGGGAGTTGTTTGGATTTGAAATGTTCTCAGGATTCAAATATGAAATTATCATGCATTACACAAATTGGAATCCATATGTTCAAGGAGAAAAGAAGCATGGAGGAGGATGTCGTATTCACTAATCCTTATGGAAAGAGAAAATTAGATGAATATCTCAATACTTCATTATCACAATTTCTCCCTCCACTAAAAAAGGATAGATTTGTGGATGTAGGAATTCCAGAGACAGAAATTTTGCAGCGGCATCATTTAGCTTTATTGTCAATGCAACAAAAAATGGCTTTGTTACCGCAACGAAGACGTATAACATTATTGTCACGCATGTGGAACTTGGTGCTTAATGAAACAAAAGAAAAGGAACACCAAGGCTAG 2898 0.3599 MIHLVTSMKEEYEYEFIKKIVTVISNKINRVLLHVADHPVGLESRLLQVKSLLDVDCDNGVGLIGIYGSGGLGKTTLTRAVYNLIADQFEGLCFLHNVRENSVKYGLEYLQEQLLSKSIGLEIKLGHVSKGIPIIKERLHQKKILLILDDVDKLKQLQVLVGEPSWLGPGSRVIITTRDKHLLSCHGIKRIYEVDFLNKDEALELFRWMAFKSNHNDSSYDYILNSAVKYASGLPLALEVVGSSLFGKCTTEWESTLQKYERIPHEDIQNILRVSYDALDEEQQSVFLDIACCFKGCKLTEVQKILHARYDHCIKSHVGVLVDKALMKINFYGFVALHDLIEDMGKEIVRQESPKEPGKRSRLWFHEDIVHGTRKIEIIRLSSLSTEETIDWNGKAFQKMKGLKALIIENGHFSKAARYLPSSLRLLKWNRCPSKSLSSIFLNKKFEYMKVLSFNDCQYLTDLPDVSGLQNLEKFSFENCNNLITIHNSIGFLNKLETLNAKGCIKLESFPPLQLTSLKKLELSICKSLKSFPELVGRLTNIKDIWLYGTSIGELPFSFQNFSELAHLYLSGCGKLRFSSFIFMMPKLSKITAKDCRLVLPKLNDKLNSTLFSNVEYLNLGNNSLSDECVPIILRLCANVKYLYLPGNDFKILPECLNECHLIRILELDGCKNLEEIKGIPPNLKKFSAIQCKSLTSSCIRMLLSQQLHEAGCTDICLPTRIKRIPDWFEHQSGGQTISFWFCKKIPSISSIFLFSFPESFSVHVRDNITIIVNLFVNGYKYTLSDDVWFVSRCPKIQTDHTYLFDLELEELIKRYRTYRKLMSKLEEALLKNEWIHVELKFGSCLDLKCSQDSNMKLSCITQIGIHMFKEKRSMEEDVVFTNPYGKRKLDEYLNTSLSQFLPPLKKDRFVDVGIPETEILQRHHLALLSMQQKMALLPQRRRITLLSRMWNLVLNETKEKEHQG* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2034 965 Gene3D Ribonuclease Inhibitor 368 538 IPR032675 -
Mtr1g2034 965 Coils Coil 809 829 - -
Mtr1g2034 965 Gene3D - 23 189 IPR027417 -
Mtr1g2034 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 290 IPR027417 -
Mtr1g2034 965 Pfam NB-ARC domain 47 281 IPR002182 GO:0043531
Mtr1g2034 965 PANTHER ARCHAEAL ATPASE 9 843 - -
Mtr1g2034 965 CDD AAA 40 179 - -
Mtr1g2034 965 Gene3D Ribonuclease Inhibitor 539 768 IPR032675 -
Mtr1g2034 965 SUPERFAMILY "Winged helix" DNA-binding domain 267 371 IPR036390 -
Mtr1g2034 965 PRINTS Disease resistance protein signature 63 78 - -
Mtr1g2034 965 PRINTS Disease resistance protein signature 138 152 - -
Mtr1g2034 965 PRINTS Disease resistance protein signature 231 245 - -
Mtr1g2034 965 PRINTS Disease resistance protein signature 513 529 - -
Mtr1g2034 965 SUPERFAMILY L domain-like 351 714 - -
Mtr1g2034 965 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 843 IPR044974 GO:0006952
Mtr1g2034 965 Gene3D - 196 280 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2034 Mtr-Chr1 30099194 30103161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2034 40 687 WRKY Transcription Factor Family AT5G45050 29.582 1.66e-62 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2034 - - mtr:MTR_1g060030 1863.58