Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2018 ATGCTAGGGAAAAGAATGGTATCATTGAAGAAACTGGCCAAGAAGGTGAAGGCTAGTGGTGGAGCTGGAGCTGAGTCAAACACTGATCCTCCCTACAATGAATGTTTGTTGAAGGGATATGAAGAAGAATTCTCCACAAGCACAACTCCAACTGGTTTTTTTGCACTCTATGTAGGGGAAGAGCACCAGAGACATGTGGTTCCAACAAGCTATCTTTCTCACCCTTTATTCAAGATGTTGTTGGAGAAGTCATACAATGAGTTTGGATTTGAGCAGAGGAATGGCTTGGTAGTTCCATGTAGTGTTTCAACATTTCAAGAGGTTGTAAATGCTATTGAATGTAACAATGGCAAGTTTCACTTAGGCAAGATTTTTCAAGATTTTGTTTGA 390 0.4026 MLGKRMVSLKKLAKKVKASGGAGAESNTDPPYNECLLKGYEEEFSTSTTPTGFFALYVGEEHQRHVVPTSYLSHPLFKMLLEKSYNEFGFEQRNGLVVPCSVSTFQEVVNAIECNNGKFHLGKIFQDFV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2018 129 Pfam Auxin responsive protein 28 111 IPR003676 GO:0009733
Mtr1g2018 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 129 IPR003676 GO:0009733
Mtr1g2018 129 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2018 Mtr-Chr1 29971660 29972653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2018 50 120 Calmodulin-binding Proteins AT5G20810 50.704 2.64e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2018 K14488 - gmx:100790208 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2018 1 29971660 29972653 Mtr1g2018 1 29971660 29972653 ECH