Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1995 ATGGGTCGTGTCAGAACCAAAACCGTGAAAAAATCCTCACGCCAAGTAATCGAACGTTACTACTCAAAAATGACCCTAGATTTCCACACAAACAAAAAGATCCTCGAAGAAGTTGCACTGATCCCATCAAAGCGTCTTCGCAACAAGATCGCTGGGTTTTCAACCCATCTCATGAAGCGTATTCAAAAGGGACCAGTTCGTGGAATCTCGTTGAAGCTACAAGAGGAAGAGCGTGAAAGGAGGATGGATTTCGTTCCTGATGTTTCTGCTATCAGGACTGACCATATTGAGGTTGATAAGGAGACTCTTGATATGCTTGCTGCTCTTGGTATGTCCGAGATTCCCGGGGTTGTTCAGGTTGATCCTGTTCCTGTTCAACAGGTGCCGTTTGGAAGAGGTGCTGGTGTTGCTGCTGGTGGTGGAAGAAGGTTTTAA 435 0.4598 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIRTDHIEVDKETLDMLAALGMSEIPGVVQVDPVPVQQVPFGRGAGVAAGGGRRF* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1995 144 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Mtr1g1995 144 PANTHER 40S RIBOSOMAL PROTEIN S17 1 143 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mtr1g1995 144 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mtr1g1995 144 PANTHER 40S RIBOSOMAL PROTEIN S17 1 143 - -
Mtr1g1995 144 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mtr1g1995 144 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mtr1g1995 144 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1995 Mtr-Chr1 29615614 29616335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1995 1 142 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 81.119 3.85e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1995 K02962 - gmx:100819067 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1995 1 29615614 29616335 Mtr1g1995 1 29615614 29616335 ECH