Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1985 ATGGTGAAAAAAATGAAGTTTCTTTCTCTTTTCAAAAACAAAGATGGTAAATCCTCTTCTTCATGGTCTTGGCCATCTTGTAACCAACCAAAAACACTTTCTTTTAGAGCCAACATAAACGACACCTTATTCAAATCCATCAACCCAACTTTTGTAGGTTCCACCAACAAAGATATCCTAGAAACTTCTGACTCCATATTAACTGAATTTTCTTATGAGTATTTCAGAGGTAATAGTGGCAATTCGATCGAGACAATGATTTGCGGTTTGTGTTTGGATAGACTTTTCTTCGATCCAAACGAAACAAGCTCGATATTAAAGACCAAAGAAATAATTAATATTTCATCCAATGAAATAATTAGCAGCAATAATAACAACTTATTATTACCATTCAAGAACACCCTTGAGGTTTCAATGGATTCGCGAAATCCTTGCGAAGATTTCAAAGAATCTATTGTGGAAATGGTGGAGGCTTATGGTATTAACGATTGGGAAACCCTAGAAAAGCTTTTGAGTTGGTATTTTGAAGTTAATGAGAAAAGAAATCATGGATTTATTATTGATGCTTTTTTTGATTTATTTGTTAGATTTGATCATGGTTCACCAAATTGTTCTCCTTTATCTATTCATAGTTGTTCTTCTCTTGATTCATTGTGGAGCACACCTTGTATTTCATCTTATAGTTCACCTTTTTAA 696 0.329 MVKKMKFLSLFKNKDGKSSSSWSWPSCNQPKTLSFRANINDTLFKSINPTFVGSTNKDILETSDSILTEFSYEYFRGNSGNSIETMICGLCLDRLFFDPNETSSILKTKEIINISSNEIISSNNNNLLLPFKNTLEVSMDSRNPCEDFKESIVEMVEAYGINDWETLEKLLSWYFEVNEKRNHGFIIDAFFDLFVRFDHGSPNCSPLSIHSCSSLDSLWSTPCISSYSSPF* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1985 231 ProSiteProfiles OVATE domain profile. 137 196 IPR006458 -
Mtr1g1985 231 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 137 196 IPR006458 -
Mtr1g1985 231 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 5 230 - -
Mtr1g1985 231 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 230 IPR038933 GO:0045892
Mtr1g1985 231 Pfam Transcriptional repressor, ovate 141 196 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1985 Mtr-Chr1 29507750 29508705 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr1g1985 Ovate 3.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1985 - - mtr:MTR_1g058000 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1985 1 29507750 29508705 Mtr1g4248 1 54141457 54142473 ECH
Mtr1g1985 1 29507750 29508705 Mtr1g1985 1 29507750 29508705 ECH
Mtr7g3282 7 49949220 49950351 Mtr1g1985 1 29507750 29508705 PCT