Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1984 ATGTCTACCTCCAAAAAAAAACTAACCTTAAACACTGTCTCCATAAACCTTGGTTGTGGAACATGTACAAGACCAAAACTTGGTTTCATATTCAACACAAAACCAAAACACAAAAACCCCACTTACCAAAACCACAAAAGACATCACAACTCTTCATCTTCAAATTCAACTTCAACCATTTGGAAACAGAAACACAGAGACACTATTGAAACTTCAACAAGCACAACCAACACAACACCAACAACAAACACATCATTCGGGTCAGAGAAATCATCATTGAAAGGATTTGGAAGAGCTGGAAATGAAGGAGTAGCTGTGGAGAAAGATTCTGATGACCCTTATCTTGATTTTCGACATTCAATGTTGCAGATGATATTGGAGAATGAGATATATTCTAAAGATGATCTTAGAGAGCTTTTGAACTGTTTTCTTCAGCTGAATTCGAAGGAACATCATGGGATTATTATAAGAGCTTTTACTGAGATTTGGAATGGAGTTTTCTCTGTTAAGTCTGGTTTTTCATCTGGGTTTCACCTTAATCGTAACTAA 549 0.3607 MSTSKKKLTLNTVSINLGCGTCTRPKLGFIFNTKPKHKNPTYQNHKRHHNSSSSNSTSTIWKQKHRDTIETSTSTTNTTPTTNTSFGSEKSSLKGFGRAGNEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSKEHHGIIIRAFTEIWNGVFSVKSGFSSGFHLNRN* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1984 182 MobiDBLite consensus disorder prediction 46 62 - -
Mtr1g1984 182 MobiDBLite consensus disorder prediction 70 91 - -
Mtr1g1984 182 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 104 164 IPR006458 -
Mtr1g1984 182 ProSiteProfiles OVATE domain profile. 106 165 IPR006458 -
Mtr1g1984 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 171 IPR038933 GO:0045892
Mtr1g1984 182 MobiDBLite consensus disorder prediction 38 99 - -
Mtr1g1984 182 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 171 - -
Mtr1g1984 182 Pfam Transcriptional repressor, ovate 110 166 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1984 Mtr-Chr1 29487238 29488307 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr1g1984 Ovate 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1984 - - pvu:PHAVU_007G269800g 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1984 1 29487238 29488307 Mtr1g1984 1 29487238 29488307 ECH