Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1966 ATGGGAATTCCTCAAGCCATGGTTGCTTTACACGAACGAGCAACGTTCGTTAAAGACTCGCTTCACAAAAGCCAAACCATTACCGATAACATGGTTTCGATTCTTGGTTCGTTTGATCATCGTCTTTCTGCGCTTGAAACCGCAATGCGTCCTACTCAGATTAAAACGCATTCGATTCGAAGTGCGCATGATAATATTGATAAGACTTTGAAAGCTGCGGAGGTGATTTTGGGGCAGTTTGATCAGACGCGTAAGGCGGAGGCTAAAATACTGCGAGGGCCACATGAGGATCTAGAAAGCTATTTGGAAGCAGTTGATCAGCTTAGATCTAATGTTCGTTTCTTCAGCAGCAAAAAGAGTTTCAAAAGCAGTGATGGTATTATCAACCATGCAAATAGCTTGCTTGCTAAAGCTATCTTAAAGCTGGAAGATGAATTTAAACATCTTTTGACAAATTACAGCAAGCCTGTGGAACCTGATCGCCTTTTTGACTGCTTGCCAAACTCTCTAAGGCCATCAGCGCAGCAGAATGCCGGTGGCGGCGGCAAAAACCATCCAGAAAAACAAAGCGTAGAAACTGTCACTTTCACCCTCCCAACACTTATTCCCCCCAGAGTTATACCATTGCTTCATGAATTAGCACTACAAATGGTTCAAGCGGGCCATCAACAGCAGCTCTTTCGAATCTATACAGACACCCGTGCTGCAGTCCTGGAGACGAGTCTAAGGAAGTTAGGTGTAGAGAGGCTGAGTAAGGATGATGTTCAAAAAATGCAATGGGAGGTTTTGGAGGCTAAGATTGGAAACTGGATTCATTACATGAGAATTGCTATCAAATTGTTGATTGTCGGGGAAAAAAAAATCTGTGATCAAATATTTGAAGGACATGATTCTGTGAAAACTCAATGCTTTGCTGAAGTCACTGGTAGCAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCGGTTGCCAGAAGCAAGAGGTCACCTGAAAAACTATTTGTTCTTCTGGACATGTACGAGATAATGAGAGAACTTCAACCAGAGATTGGGATACTGTTTGATAGTAAAGTTTGCGCTGAAATGCGGGAAGCTGCAATCAATTTGACAAAGCGCCTTGCTCAGACAGCCCAAGAAACCTTTGGTGACTTTGAGGAAGCAGTTGAAAAAGATGCTACTAAAACTGCTGTGCAAGATGGAACTGTCCACCCTCTAACCAGCTATGTTATCAATTACGTAAAATTTCTCTATGATTATCAAGCAACTCTAAAACAACTTTTTCAAGAGTTTGATCCCGCCGATCCAGAATCTCAGTTAGCATCTGTTACAACAAGGATTATGCAGGCTCTCCAGAATAACCTAGATGGAAAGTCTAAACTATATAAAGACCCAGGACTAACCCAGTTATTTCTTATGAACAATATTCATTACATAGTGAGATCTGTGAGAAGGTCTGAGGCAAAGGACATGTTGGGCGATGACTGGGTACAAATACACAGAAGAATTGTACAGCAGCATGCAAATCAGTATAAAAGGATCTCTTGGGCAAAGATCTTGCAGTGCCTCACTGTCCAAGGAGGTAATTCATCTGGTGGAGGGGACAGCAACAGTAATATTTCAAGATCATCGGTTAAGGAAAGGTTCAAGACATTTAACACTCAATTTGAGGAGCTTCATCAGAGACAATCTCAGTGGACTGTTCCTGATAGTGAATTGCGAGAATCACTTAGACTGGCTGTTGCTGAAGTTCTGTTGCCTGCCTATAGATCTTTCCTTAAACGTTTTGGGCCCATGATTGAGAATGGCAAAAATCCTCAAAAGTACATCAGATACTCTCCTGAGAATCTTGAACAAATGCTCGGTGAATTTTTCGAAAGCAAGGCATGGAGTGAACAGAAGCGGTGA 1902 0.4222 MGIPQAMVALHERATFVKDSLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEVILGQFDQTRKAEAKILRGPHEDLESYLEAVDQLRSNVRFFSSKKSFKSSDGIINHANSLLAKAILKLEDEFKHLLTNYSKPVEPDRLFDCLPNSLRPSAQQNAGGGGKNHPEKQSVETVTFTLPTLIPPRVIPLLHELALQMVQAGHQQQLFRIYTDTRAAVLETSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAIKLLIVGEKKICDQIFEGHDSVKTQCFAEVTGSSVAMLLSFGEAVARSKRSPEKLFVLLDMYEIMRELQPEIGILFDSKVCAEMREAAINLTKRLAQTAQETFGDFEEAVEKDATKTAVQDGTVHPLTSYVINYVKFLYDYQATLKQLFQEFDPADPESQLASVTTRIMQALQNNLDGKSKLYKDPGLTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQGGNSSGGGDSNSNISRSSVKERFKTFNTQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPQKYIRYSPENLEQMLGEFFESKAWSEQKR* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1966 633 SUPERFAMILY Cullin repeat-like 76 624 IPR016159 -
Mtr1g1966 633 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 629 IPR004140 GO:0000145|GO:0006887
Mtr1g1966 633 Coils Coil 358 378 - -
Mtr1g1966 633 Pfam Exo70 exocyst complex subunit 269 620 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr1g1966 633 Gene3D Exocyst complex component Exo70 74 633 - -
Mtr1g1966 633 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1966 Mtr-Chr1 29256680 29263605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1966 1 633 EXO70 exocyst subunit family AT5G52340 79.338 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1966 K07195 - gmx:100779774 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1966 1 29256680 29263605 Mtr1g1966 1 29256680 29263605 ECH