Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1962 ATGGCAGAAGCACAACCCCACAACCGGGGCAGAAGATGTTGTTGCTGCCTTTTCGGTATAATTTGGAAACTCCTCCTAGCAATCATCGTTCTCGCTGGTCTCATAATCCTTATTTTTTGGCTCGTTGTCCAACCTCGAACCTTCAAGTTCAGTGTCAAAGAAGCAAAACTCACCAAATTCAACTATAGCGACGACACCAACACCCTCCATTACAACCTCGTACTCAACTTCACGGCCCGTAATCCAAACAAAAAACTCAACATCTACTACGATGTAATCGAAGGACATGCGTCTTACGAAGGGACTAGGTTTGCTTCAACAAAGGTTATAACATGGTTAAATTCATTCCGACAATACACTAAGAGCACGAATCCTATGAGTGGTGTTTTCTCTGGGCAACGTGTTGTGGTTTTTGATCGTGATCAGGTTTCTAACTTCGAACGTGATGAGAAAGATGGAGTTTTTCATATTAATGTGAAATTAAACTTTGACATGAGGTTTAGACTTGGTGATTATATTGGTCCACATACTAAGGGTAACATTAAGTGTAGGCTTGATGTTCCTTTTGTTGCTAATGGAACTAAGGTCATGAAAGCATTTGAACCCACCACGTGTGATGTAAATTTCTAA 630 0.4079 MAEAQPHNRGRRCCCCLFGIIWKLLLAIIVLAGLIILIFWLVVQPRTFKFSVKEAKLTKFNYSDDTNTLHYNLVLNFTARNPNKKLNIYYDVIEGHASYEGTRFASTKVITWLNSFRQYTKSTNPMSGVFSGQRVVVFDRDQVSNFERDEKDGVFHINVKLNFDMRFRLGDYIGPHTKGNIKCRLDVPFVANGTKVMKAFEPTTCDVNF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1962 209 PANTHER OS05G0367900 PROTEIN 7 207 IPR044839 GO:0098542
Mtr1g1962 209 PANTHER PROTEIN, PUTATIVE-RELATED 7 207 - -
Mtr1g1962 209 Pfam Late embryogenesis abundant protein 77 173 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1962 Mtr-Chr1 29124421 29125373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1962 42 190 SNARE and Associated Proteins AT1G32270 30.000 1.77e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1962 - - gmx:100795302 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1962 1 29124421 29125373 Mtr1g1962 1 29124421 29125373 ECH
Mtr7g3295 7 50060986 50061978 Mtr1g1962 1 29124421 29125373 PCT