Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1961 ATGGACCAAGAAAACCCCAACCCACCATCAGAACAACCCTCAAAACGTAGCACAAGATGTTGTTTCTGTCTCTACCGTGTCTTATGGATAATTCTTGTCACAATTATCATCCTTGTTTCCCTCATCATCCTCGTTATATACATCATAATCACACCACGTTCGTTCAAATTCCATGTTAACCAAGCCAAACTCACTCAATTCAACTTCACCAACAACAACACCACCTTAAACTATAACCTAGTACTCAACTTCACTGCTCAAAACCCTAACAAAAAACTCAAAATCTACTACGATGTCGTTGAAGCCAACGCTTTCTATAAGGGATACAATTTCTCTGCCACGGATATGAACAAGCCATTGCGCACCCTTCAGGAAACCAAAAGTGTGGATTACCGTATGAGTGCTGTTTTTATTGGTCAACATGTGATGATGCTTGATCGTGATGAGGTTGATGAGTTTCAAGAAGATTACAAAAATGGTATTTTTGGTATTGATATTAAGATTTATTTTAGTATAAGGTTTAGGCTTGGAAATTTTATATTTGGTGACACCAAAGTCCAAGCAAAATGTGATCTAAAGGTTCCTCTTAGTTCTAATAATAGTGGGAAAATGGTTGATCCGTTTGATCCCACCAAGTGTGTGGTGGATTTCTGA 654 0.3807 MDQENPNPPSEQPSKRSTRCCFCLYRVLWIILVTIIILVSLIILVIYIIITPRSFKFHVNQAKLTQFNFTNNNTTLNYNLVLNFTAQNPNKKLKIYYDVVEANAFYKGYNFSATDMNKPLRTLQETKSVDYRMSAVFIGQHVMMLDRDEVDEFQEDYKNGIFGIDIKIYFSIRFRLGNFIFGDTKVQAKCDLKVPLSSNNSGKMVDPFDPTKCVVDF* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1961 217 PANTHER PROTEIN, PUTATIVE-RELATED 8 216 - -
Mtr1g1961 217 PANTHER OS05G0367900 PROTEIN 8 216 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1961 Mtr-Chr1 29066629 29067282 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1961 49 202 SNARE and Associated Proteins AT1G32270 32.484 3.36e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1961 - - ccaj:109813660 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3296 7 50066683 50067444 Mtr1g1961 1 29066629 29067282 PCT