Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1959 ATGGCCGGAAATCAACTCAACGGCGCTTATTACGGCCCATCGATCCCTCCACCACCGCAACCAAAACCTCGTCGACACCGCAACGACGACGGTTGCGGCATCTGCAGCTGTCTCTGCGGCTGCGTTCGTGGTTGTTGCGGCTGCATTTTCAACTGCATCTTAGGTTTAATCTGCAAAATCATCACCACAATCATCGTCATCATCGTGATCCTCGGGTTCATCTTCTGGCTCATTGTTCGACCTAACGTCGTCAAATTCACCGTCAACGATGCAACCCTTACGCAATTCAATTTTAATGAAACCAACACACTTCACTACGATCTCGCTCTTAACGTCACGGTTCGTAACCCTAATCGAAGAGTTGGTATTTACTATGACACCATTGAAACGATGGCGTTTTATAAGGATGTTCAGTTTGCGAATCAAACCCTAGGGAGATTCTTTCAGCATCATAAGAATACGAGTTTTTTGAATCCTGTTTTCAAAGATAAACAAGTTGTTATTCTGAATGAAGATCAGAATAAGGAGTTTGATAAAGAGAAAATTGATGGGGTTTATGGAATTGATTTTAAGATGTTGATTGAAATGAGGTTTAAATTTGGTTGGTTTAAGATTGGACATGCGAAACCTAAGGTTCGTTGTGATTTGAAGGTACCTTTGAAATCACATAATGGTTCTTCTTCTTTGGGGAATGTGTTTCAAGCTACTGAATGTGATTGGGATTACAAATGGAGATTGTGGCATTAG 747 0.4163 MAGNQLNGAYYGPSIPPPPQPKPRRHRNDDGCGICSCLCGCVRGCCGCIFNCILGLICKIITTIIVIIVILGFIFWLIVRPNVVKFTVNDATLTQFNFNETNTLHYDLALNVTVRNPNRRVGIYYDTIETMAFYKDVQFANQTLGRFFQHHKNTSFLNPVFKDKQVVILNEDQNKEFDKEKIDGVYGIDFKMLIEMRFKFGWFKIGHAKPKVRCDLKVPLKSHNGSSSLGNVFQATECDWDYKWRLWH* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1959 248 Pfam Late embryogenesis abundant protein 111 210 IPR004864 -
Mtr1g1959 248 PANTHER OS05G0367900 PROTEIN 21 242 IPR044839 GO:0098542
Mtr1g1959 248 MobiDBLite consensus disorder prediction 1 23 - -
Mtr1g1959 248 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1959 Mtr-Chr1 29059592 29060595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1959 78 231 SNARE and Associated Proteins AT1G32270 35.714 4.16e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1959 - - aprc:113873272 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3297 7 50073822 50074708 Mtr1g1959 1 29059592 29060595 PCT