Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1940 ATGGCTGAGTTAACATTTTGCCAGAAAGTTAATGCGTGCTGCAAATTTTATAAATCATACTTCCTTATGTTCGGAATCCAACTTGGTTCTGCTGGCATGTTTGTCATCACCATGACTGCCTTTAACAAGGGCATGAGTCATTACGTTTTTGTGGTATATCGTAATACCATTGCCACAATTGCTCTCGCTCCCTTAGCCTATTTCCTAGAAAGGAACATTAGGCCCAAGATGACAGTTCGGGTATTTTCAGAAATCATGGCACTAGCATTTGTCGAGGTAACACTTGGTCAATGCTTCTCTTTCTTGGGGATGAAGCTAACATCAGCATCTTTTGCATCTGCTGTGATGAATTCCGTACCTTCCATCACCTTTCTACTTGCATTAATTTTTCAATTGGAAGGTATGAAAATTAAGGAGATAGCATGTCAAGGCAAAGTGATTGGCACAATGGTGAGTCTTGGTGGTGCTCTACTAATGGTACTATACAAAGGTCCTGTTCTTGGGTCATCAGCAGCTACTCAGATGCATCAACCTGAAAATGTGAACGATCCCACTGGTGCACACTGGCTCCTTGGAGCATTGTTTCTCGTAATTGGTTGTGTTGGAATCTCTGCCTTCTACATTTTACAAGCCACATCATTGAGAAAGTATCCAGCAAATATGTCATTAGCCACATGGGTTTGCTTTGTTGGTGCACTTCAAAGCACTGTTGTAACTATTGTAATGGAGCGCAAACACCCTGAAACTTGGTCTTTGGGCCTGGACTCTAGACTCTTTGCTCCAGTATATGCGGGAATAGTAACATCGTCAATTCAATATTATGTGCAAGGCTACGTCATTAAAGCTACGGGGCCTGTTTTTGTGACTGCTTTTACTCCTTTGCGGATGATTGCAGTCACAGCTTTGGCTTGTATTTTTCTCAAAGAGAAACTCCACCTAGGAAGCATTGTTGGAGGACTGGTCGTGGTTATAGGACTATACCTGGTTGTTTGGGGAAAATCAAAAGAGCAAAGAGCAATGGCGTCAGATGAGTCACAAGGACAACAACAATTACCAATCATTGTCCCCAGAATTGATGTCAGTTCTGGATAA 1092 0.4212 MAELTFCQKVNACCKFYKSYFLMFGIQLGSAGMFVITMTAFNKGMSHYVFVVYRNTIATIALAPLAYFLERNIRPKMTVRVFSEIMALAFVEVTLGQCFSFLGMKLTSASFASAVMNSVPSITFLLALIFQLEGMKIKEIACQGKVIGTMVSLGGALLMVLYKGPVLGSSAATQMHQPENVNDPTGAHWLLGALFLVIGCVGISAFYILQATSLRKYPANMSLATWVCFVGALQSTVVTIVMERKHPETWSLGLDSRLFAPVYAGIVTSSIQYYVQGYVIKATGPVFVTAFTPLRMIAVTALACIFLKEKLHLGSIVGGLVVVIGLYLVVWGKSKEQRAMASDESQGQQQLPIIVPRIDVSSG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1940 363 PANTHER WAT1-RELATED PROTEIN 14 352 - -
Mtr1g1940 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 335 - -
Mtr1g1940 363 PANTHER WAT1-RELATED PROTEIN 14 352 IPR030184 GO:0016021|GO:0022857
Mtr1g1940 363 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020|GO:0016021
Mtr1g1940 363 Pfam EamA-like transporter family 20 160 IPR000620 GO:0016020|GO:0016021
Mtr1g1940 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1940 Mtr-Chr1 28731024 28734622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1940 15 362 Nodulin-like Gene Family AT2G39510 42.857 1.06e-100 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1940 - - gmx:100813852 470.7