Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1913 ATGAATCCAGAAATGTATTTTGCAACCACAATGCTCATTCTCTTTTTAACATACATTTCTATAAGCTTAATTTCACTCATTGGTAGAACCAAAAAACAAAAGTACAATCTTCCACCAGGTCCTTCACTTCTTACAATTATGAGAAATGTTTTTGAATTAGGAAAAAAACCACAATACTCATTAGCCAAATTCTCCAAAATATATGGCCCAATAATGCATTTAAAGCTAGGTCAAATAACAACTATAGTAATTTCATCACCAGATATAGCACAAGAAGTGTTTCAAACCCATGATCTCTCGATCTCGGACCGAACAATTCCTCAAGCTGTAGCAGTTCTTGGTCATGAACATTTTAGCTTACCATTTATGCCAATGTCAAATCTTTGGAGAGACCTAAGAAAAATATGCAAAAACAATTTGTTTTCTAACAAAACTCTTGATGCTAGCAATGAACTTAGGTGTAAGAAGCTGCAAGAGCTTTTATGTGATATTGATAGAAGTAGCTTGGTTGGTGAAGCAGTGGATGTTGAGAAAGCTGCTTTTAAGACTTTGTTGAATGTTTTGTCAAACACTTTTTTCTCCATGGATTTTGTTAACTCTGCAGGTGAAACTGATGAGTATAAAGATATAGTTGAAAGTCTTATGACAGCAATAGGAACACCAAACTTGGTTGATTTTTTCCCTATTTTGAGGATGTTTGACCCACAAGGTATCAGGGGAATATCAGCTACTTATGCTGAAAAATTGTTGCAAATCTTTGATTCCTATATTACCAAGAGATTGGAGTTAAGAAATGAAGAAAATTATGTCACAAATGGTGACATGTTAGACAATTTGCTCAACATCTCTCAAGAGAATGGCCAAATGATGGACACAACAAAGATTCAACATTTGTTTCTTGATTTATTTGTTGCGGGGACAGATACAACTTCCTACGCTATAGAGAGAGGAATGGCAGAACTGGTCCACAACCCACATGCAATGTTAAAAGCCAAAGAAGAGCTTAAACAAATAATTGGTATAGGAAATCCAATTGAGGAATCAGACATTACTAGACTCCCATATTTGCAAGCAGTAGTAAAAGAAACGTTACGCATGCACCCATCAGCTCCACTTTTACTACCAAAAAAAGCTAGGGTTGATGTTAAAATTCATGGATACACTATCCCTCAAGGTGCACAGGTCGTAATAAATGAATGGGCCATAGGAAGAAACCCTAATATTTGGGATAATCCAAATTCATTTTTGCCTGAGAGGTTTTTGGGGTCAGAAATTAATTTCAATGGTCAAAATTTTCAATTGACACCATTTGGTGGTGGGAGAAGAATATGCCCTGGCATGCCACTTGCTACTAAAATGATACATATGATGTTAGGATCATTGATTAATTTCTTTGATTGGAAACTGGAAAATGGAGATAGAGACATTAATCAACCCTTGCGAGCTATTCCAGTTAGAGTAAATAAGGTGTAA 1473 0.3557 MNPEMYFATTMLILFLTYISISLISLIGRTKKQKYNLPPGPSLLTIMRNVFELGKKPQYSLAKFSKIYGPIMHLKLGQITTIVISSPDIAQEVFQTHDLSISDRTIPQAVAVLGHEHFSLPFMPMSNLWRDLRKICKNNLFSNKTLDASNELRCKKLQELLCDIDRSSLVGEAVDVEKAAFKTLLNVLSNTFFSMDFVNSAGETDEYKDIVESLMTAIGTPNLVDFFPILRMFDPQGIRGISATYAEKLLQIFDSYITKRLELRNEENYVTNGDMLDNLLNISQENGQMMDTTKIQHLFLDLFVAGTDTTSYAIERGMAELVHNPHAMLKAKEELKQIIGIGNPIEESDITRLPYLQAVVKETLRMHPSAPLLLPKKARVDVKIHGYTIPQGAQVVINEWAIGRNPNIWDNPNSFLPERFLGSEINFNGQNFQLTPFGGGRRICPGMPLATKMIHMMLGSLINFFDWKLENGDRDINQPLRAIPVRVNKV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1913 490 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 9 473 - -
Mtr1g1913 490 SUPERFAMILY Cytochrome P450 38 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Mtr1g1913 490 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 Gene3D Cytochrome P450 27 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 Pfam Cytochrome P450 38 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1913 490 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1913 Mtr-Chr1 28316629 28318962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1913 10 486 Cytochrome P450 AT2G45550 42.485 2.34e-147 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1913 - - gmx:100792017 630.943