Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1905 ATGGGAAACAACTGTGTCGGAACGAGAACCTTTTTTTCAAAGGATGAATCATCATCACGTGCAACTTTTCCAAGTCCATCTTGCTGGTCACGTTCCAAGAAAGATAGTGCACACAAAACAAGTCCAACAAAACCAAAAGAATCTGTTCAAAACAATCCTCCACCGGTAATGAAAATCGAAAAGGAAGATGAAAAGCCGCCACCACAGCAACATCATCATCAAAAACCGCGACAAAAACCACAAACTAATGAAGCTGTTGTTGCTACACCTGCAAAACCAAAGAGACCTCACAATGTGAAGAGACTAGCAAGTGCAGGGCTAAAAGCAGATTCAGTTTTACAGCGAAAAACGGTTAGTCTTAAGGAGTTTTATACTTTAGGACCAAAGCTAGGACAAGGGCAATTTGGAACTACATTCCTTTGTGTGGAGAAATCTACTGGGAAAGAGTATGCATGCAAGTCAATCATGAAGAGGAAGTTGTTGACTGAAGAGGATGTGGAAGATGTGAGGAGAGAGATTCAGATTATGCATCACTTGGCTGGCAGTTCGAATGTGATTTCGATTAAGGAAGCTTCTGAGGATGCTGTTGCTGTTCATGTTGTTATGGAGTTGTGTGCAGGTGGTGAACTTTTTGATAGGATTGTGGAAAGAGGGCATTATACAGAAAGAAAGGCGGCGAAACTTGCAAGGACTATTGTTGGTGTTATTCAGTCATGTCATTCTCTTGGTGTAATGCATCGCGATCTTAAGCCGGAGAATTTTCTTTTTGTTAATCAGCAGGAAGAATCTCCCCTTAAGGCAATCGACTTTGGATTATCTTGTTTTTTCAAACCAGGTGACATTTTCAATGATGTAGTAGGAAGTCCATATTATGTTGCACCTGAAGTTTTACGCAAACGATATGGTCCAGAAGCGGATGTGTGGAGTGCCGGTGTCATCTTGTACATTCTCTTATGCGGTGTGCCTCCATTTTGGGGTGAATCGGAACAAGATATATTTGAGGCCATTTTGAATAGCGATCTTGATTTCTCATCGGATCCATGGCCTAGTATCTCTGAAAGTGCAAAAGACTTGGTTAAGAAGATGCTTGTCAGAGACCCTAGTAAGCGGTTAACAGCTTTTGACGTTCTTCGTCATCCATGGATCCTAATTGATGGAGCAGCACCAGACAAGCCTCTAGATTCTGCAGTTTTGAGTCGCATGAAGCAGTTTACTGCAATGAACAAGCTCAAGAAAATGGCACTTAGAGTTATTGCAGAGAATCTATCTGAAGAAGAAATTGCTGGATTGAAAGAAATGTTTAAGATGATCGACACAGATAATAGTGGTCATATTACCTTTGAAGAACTCAAGGTTGGACTGAAAAGATTTGGTGCCAATCTAAAAGAATCAGAAATTTACGATCTAATGAAAGCTGCAGATGTTGATAACAGTGGCACGATCGACTATGGAGAATTCATAGCTGCAACATTACACTTAAACAAAGTTGATAGGGAAGATCATTTACATGCAGCATTCTCATATTTTGATAAAGATGGAAGTGGATACATCACAAAAGATGAGCTTCAAAAAGCTTGTGAAGAATTTGGCTTTAGAGATGTCCCCTTGGAGGAAATGATCCGAGAAGTTGATCAGAATAATGATGGAAGAATAGATTACAATGAATTTGTTGCTATGATGCATAGAGGGAATGCAGAAATGGGTAAGAGGGGTCGAAAAGGTAGCAGTAGTTTTAGCATTGGATTTAGGGAGGCACTACCAGTATGTTAA 1770 0.4028 MGNNCVGTRTFFSKDESSSRATFPSPSCWSRSKKDSAHKTSPTKPKESVQNNPPPVMKIEKEDEKPPPQQHHHQKPRQKPQTNEAVVATPAKPKRPHNVKRLASAGLKADSVLQRKTVSLKEFYTLGPKLGQGQFGTTFLCVEKSTGKEYACKSIMKRKLLTEEDVEDVRREIQIMHHLAGSSNVISIKEASEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIQSCHSLGVMHRDLKPENFLFVNQQEESPLKAIDFGLSCFFKPGDIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLCGVPPFWGESEQDIFEAILNSDLDFSSDPWPSISESAKDLVKKMLVRDPSKRLTAFDVLRHPWILIDGAAPDKPLDSAVLSRMKQFTAMNKLKKMALRVIAENLSEEEIAGLKEMFKMIDTDNSGHITFEELKVGLKRFGANLKESEIYDLMKAADVDNSGTIDYGEFIAATLHLNKVDREDHLHAAFSYFDKDGSGYITKDELQKACEEFGFRDVPLEEMIREVDQNNDGRIDYNEFVAMMHRGNAEMGKRGRKGSSSFSIGFREALPVC* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1905 589 Gene3D Phosphorylase Kinase; domain 1 127 209 - -
Mtr1g1905 589 ProSiteProfiles EF-hand calcium-binding domain profile. 536 566 IPR002048 GO:0005509
Mtr1g1905 589 CDD EFh 501 561 IPR002048 GO:0005509
Mtr1g1905 589 SUPERFAMILY EF-hand 421 563 IPR011992 -
Mtr1g1905 589 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Mtr1g1905 589 ProSitePatterns EF-hand calcium-binding domain. 544 556 IPR018247 -
Mtr1g1905 589 ProSiteProfiles Protein kinase domain profile. 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1905 589 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Mtr1g1905 589 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Mtr1g1905 589 SUPERFAMILY Protein kinase-like (PK-like) 123 383 IPR011009 -
Mtr1g1905 589 SMART efh_1 429 457 IPR002048 GO:0005509
Mtr1g1905 589 SMART efh_1 535 563 IPR002048 GO:0005509
Mtr1g1905 589 SMART efh_1 501 529 IPR002048 GO:0005509
Mtr1g1905 589 SMART efh_1 465 493 IPR002048 GO:0005509
Mtr1g1905 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 53 573 - -
Mtr1g1905 589 Pfam EF-hand domain pair 500 560 IPR002048 GO:0005509
Mtr1g1905 589 Pfam EF-hand domain pair 430 490 IPR002048 GO:0005509
Mtr1g1905 589 MobiDBLite consensus disorder prediction 1 98 - -
Mtr1g1905 589 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Mtr1g1905 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Mtr1g1905 589 MobiDBLite consensus disorder prediction 1 31 - -
Mtr1g1905 589 Pfam Protein kinase domain 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1905 589 CDD EFh 430 489 IPR002048 GO:0005509
Mtr1g1905 589 CDD STKc_CAMK 123 381 - -
Mtr1g1905 589 Gene3D - 389 565 - -
Mtr1g1905 589 ProSiteProfiles EF-hand calcium-binding domain profile. 497 532 IPR002048 GO:0005509
Mtr1g1905 589 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Mtr1g1905 589 MobiDBLite consensus disorder prediction 57 71 - -
Mtr1g1905 589 SMART serkin_6 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1905 589 PANTHER CALCIUM-DEPENDENT KINASE 53 573 - -
Mtr1g1905 589 Gene3D Transferase(Phosphotransferase) domain 1 210 386 - -
Mtr1g1905 589 ProSitePatterns Protein kinases ATP-binding region signature. 130 157 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1905 Mtr-Chr1 28267680 28271958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1905 45 580 EF-hand Containing Proteins AT3G10660 74.170 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr1g1905 Pkinase 3.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1905 K13412 - gmx:100783079 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1905 1 28267680 28271958 Mtr7g3330 7 50464050 50468054 PCT