Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1893 ATGATGAGGGGAAACAGCAACGAAGAGCTATGGCTGGTGGTCGATGGTACCGGACAAGCACAGCTGTTAGAGTCTGGAGAACATGAGATCATGAGACGTACTGGTCTCACCGCAACTGACCTTCAAATTCTTTCCACCCCTTCCACTATTCTCGGACAACTTCAAGACAGAATCCTCCGTTACGATGCAACCACCACTCCTCTCCCGTTTGAATTCACAGCACTTGAGGTGTGTCTTGAGGCGGTTTGCATAGTGTTGAAGAATGAAACAAAGACACTAGAACAAGATGCACGTCCTGCTCTAGATGAACTAGATTCAAACATAAGTGGTAACAGTTTGGTTGTTGTTGGCGAATTGAAGATCCGGTTGGTTGACATTACCGCTCGGGTTCAAAAGTTAACAGATGAATTAGATCATTTGTTCCTTGATGCAAATTTGGCTGAGATTTATCTCACCAAAAAACAACAAATGGAAGAAAACTCCTCTACCACCACCACAGATGCCACCGACGAGCTTGTGCTAGACATGTTCGAAGAATACGTCGTTCAGATTAACTATACTCTCCACGAACTCTCCATGCTGAGGAAGGATGTTGAGTACAAAGAGGAGTACTTCAACAATGTGTTGGTTTACCAACAGGAACGTCGCGCACAAAAGAAATTCAAGCTGACCATTGCGTATGTGGCAGTAACAGGATGTATTACTGTGATTGGTAATTTACGCAACAGTGTTTGTAATGACGGAGTTTTTCTCTTCTCCGTTGGTATCTGCATTAATGTGTTCATATTCTTGTATATGTGTGTCATTGTCTGGTCGAAGCATAAATGCTTGTTAGATTAA 840 0.4298 MMRGNSNEELWLVVDGTGQAQLLESGEHEIMRRTGLTATDLQILSTPSTILGQLQDRILRYDATTTPLPFEFTALEVCLEAVCIVLKNETKTLEQDARPALDELDSNISGNSLVVVGELKIRLVDITARVQKLTDELDHLFLDANLAEIYLTKKQQMEENSSTTTTDATDELVLDMFEEYVVQINYTLHELSMLRKDVEYKEEYFNNVLVYQQERRAQKKFKLTIAYVAVTGCITVIGNLRNSVCNDGVFLFSVGICINVFIFLYMCVIVWSKHKCLLD* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1893 279 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 8 53 IPR039204 -
Mtr1g1893 279 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 65 278 IPR039204 -
Mtr1g1893 279 PANTHER MAGNESIUM TRANSPORTER MRS2-3 8 53 - -
Mtr1g1893 279 PANTHER MAGNESIUM TRANSPORTER MRS2-3 65 278 - -
Mtr1g1893 279 Coils Coil 116 136 - -
Mtr1g1893 279 Gene3D Magnesium transport protein CorA, transmembrane region 42 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1893 Mtr-Chr1 28102157 28103286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1893 11 206 MRS2 Gene Family AT5G09690 31.295 1.74e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1893 - - mtr:MTR_1g055050 505.753