Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1885 ATGGGCAACAACTGTGTGGGACCAAACCTCGGTAACAATGGTGGTTTCCTACAATCCGTTTCCGCGGCCGTATGGAAAACACGTCCGCCAGAGGCAAGGCTTCCTCCTCCTAATGCCGAAGATAAAAACAAAACTCCGACAACACCGGAAAATGCTGTAACAGGTTCCTCGAAACCGGAGTCTTGTGCTGGTGGGAAAGTTTCTGAACATGTTTCGGTTCAGAGCACACCTCCTGAACAGGTGAAAATAGCAGCCGCAGAAATAAAACCGCTCGAACATGAAAAGCCGGTAAAAGCAGCAGCATCTAGTGCTGTTGCTGGTGGTGGTGGTGGTGGTGATGCGGATAAACCTAAGAAACCAACACATGTGAAAAGATTATCAAGTATTGGACTTCAGGTAGAATCTGTATTGGGAAGGAAAACTGAAAACATAAAAGATTTTTACAGTTTGGGGAGAAAATTAGGTCAAGGGCAATTTGGGACAACATTTCTATGTATGGCAAAAGGGACTAATAAGGAATTTGCTTGCAAGTCAATTGCAAAGAGGAAATTAACAACACAAGAGGATGTGGAGGATGTAAGAAGAGAGATTCGGATAATGCACCATTTGGCAGGTCATCCGAATGTGATACAAATAGTTGGTGCTTATGAAGATGCCGTTGCGGTTCATGTTGTTATGGAGTTATGTGCTGGTGGTGAGCTTTTCGATAGGATTATACAGAGAGGGCATTATAGTGAAAGAAAAGCTTCTGAACTTACTAGGTTGATTTTAGGTGTTGTTCAAGCTTGTCATTCTTTAGGGGTTATGCATAGAGATTTGAAGCCGGAAAATTTTCTGTTTGTTAGTCATGATGAAGAATCAGCACTTAAGACGATTGATTTTGGACTCTCGGTGTTTTTTAGACCAGGTGAGACATTTACTGATGTGGTTGGAAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGAATTACGGTCAAGAATGTGATGTATGGAGCGCTGGGGTGATCATTTATATTCTACTCAGTGGAGTTCCACCATTTTGGGATGAAACTGAACAAGGAATATTTGAGCAAGTATTGAAAGGAGAGCTTGACTTTATTTCTGATCCGTGGCCAAGCATATCTGAAAGTGCGAAGGATCTTGTTCGAAGAATGCTTATAAGGGATCCTAAGAAGAGGATGACGGCACATGAAGTTCTTTGCCATCCTTGGGTTCAGGTTGGAGGTGTTGCTCCTGATAAACCGCTTGATTCCGCTGTCTTATCTCGTTTGAAGCAATTCTCTGCAATGAACAAGCTCAAAAAAATAGCCATTCGAGTAATTGCCGAAAATCTGTCCGAGGAGGAAATAGCAGGACTTAAAGAAATGTTCAAGATGATAGACACGGATAATAGCGGACAGATCAGTCTTGAAGAACTGAAAAATGGCTTAGAAAGAGTGGGTTCCGTTCTTAAGGATTCTGAAATCAACTGGTTAATGCAAGCGGCAGACGTTGATAATAGTGGTACCATAGACTATGGTGAATTCATAGCAGCCATGCTTCATCTAAACAAGGTTCAAAAGGAAGATCATCTATTTGCAGCCTTTAACTACTTTGACAAAGATGGGAGTGGATACATTACAAAGGATGAGCTCCAACAAGCCTGTAACCAGTTTGGCCTACAAGAGGATCATCTAGATGATATAATACGTGAAGCTGATCGCGATAATGATGGTCGCATTGACTACAGTGAATTTGTTGCAATGATGCAAGACACTGATTTTGGCAAAAAGGGGCTATAA 1785 0.4207 MGNNCVGPNLGNNGGFLQSVSAAVWKTRPPEARLPPPNAEDKNKTPTTPENAVTGSSKPESCAGGKVSEHVSVQSTPPEQVKIAAAEIKPLEHEKPVKAAASSAVAGGGGGGDADKPKKPTHVKRLSSIGLQVESVLGRKTENIKDFYSLGRKLGQGQFGTTFLCMAKGTNKEFACKSIAKRKLTTQEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYSERKASELTRLILGVVQACHSLGVMHRDLKPENFLFVSHDEESALKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKNYGQECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISDPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQISLEELKNGLERVGSVLKDSEINWLMQAADVDNSGTIDYGEFIAAMLHLNKVQKEDHLFAAFNYFDKDGSGYITKDELQQACNQFGLQEDHLDDIIREADRDNDGRIDYSEFVAMMQDTDFGKKGL* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1885 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Mtr1g1885 594 ProSiteProfiles Protein kinase domain profile. 148 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1885 594 SUPERFAMILY EF-hand 445 585 IPR011992 -
Mtr1g1885 594 MobiDBLite consensus disorder prediction 41 58 - -
Mtr1g1885 594 SMART efh_1 525 553 IPR002048 GO:0005509
Mtr1g1885 594 SMART efh_1 489 517 IPR002048 GO:0005509
Mtr1g1885 594 SMART efh_1 559 587 IPR002048 GO:0005509
Mtr1g1885 594 SMART efh_1 453 481 IPR002048 GO:0005509
Mtr1g1885 594 MobiDBLite consensus disorder prediction 94 125 - -
Mtr1g1885 594 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 88 587 - -
Mtr1g1885 594 MobiDBLite consensus disorder prediction 21 79 - -
Mtr1g1885 594 ProSiteProfiles EF-hand calcium-binding domain profile. 557 590 IPR002048 GO:0005509
Mtr1g1885 594 ProSiteProfiles EF-hand calcium-binding domain profile. 521 556 IPR002048 GO:0005509
Mtr1g1885 594 ProSitePatterns Protein kinases ATP-binding region signature. 154 181 IPR017441 GO:0005524
Mtr1g1885 594 CDD STKc_CAMK 147 405 - -
Mtr1g1885 594 PANTHER SERINE/THREONINE-PROTEIN KINASE 88 587 - -
Mtr1g1885 594 Gene3D Transferase(Phosphotransferase) domain 1 234 411 - -
Mtr1g1885 594 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Mtr1g1885 594 Pfam EF-hand domain pair 454 514 IPR002048 GO:0005509
Mtr1g1885 594 Pfam EF-hand domain pair 524 585 IPR002048 GO:0005509
Mtr1g1885 594 Gene3D Phosphorylase Kinase; domain 1 150 233 - -
Mtr1g1885 594 Pfam Protein kinase domain 148 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1885 594 ProSitePatterns EF-hand calcium-binding domain. 568 580 IPR018247 -
Mtr1g1885 594 ProSitePatterns EF-hand calcium-binding domain. 534 546 IPR018247 -
Mtr1g1885 594 ProSiteProfiles EF-hand calcium-binding domain profile. 485 520 IPR002048 GO:0005509
Mtr1g1885 594 Gene3D - 413 589 - -
Mtr1g1885 594 SUPERFAMILY Protein kinase-like (PK-like) 146 407 IPR011009 -
Mtr1g1885 594 SMART serkin_6 148 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1885 594 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Mtr1g1885 594 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1885 Mtr-Chr1 27930334 27934905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1885 1 594 EF-hand Containing Proteins AT2G38910 74.074 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr1g1885 Pkinase 4.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1885 K13412 - gmx:100813232 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1885 1 27930334 27934905 Mtr1g1885 1 27930334 27934905 ECH