Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1876 ATGCATTGTTTCGTGGCTTACTTAGCTCATGCCAATGCCAAAAACATCTCCACAGATCAATCTGCTCTTCTCGCATTCAAATCCCTCATTACTTCAGACCCCAATGATATGTTAGCTAATAATTGGTCAACCTCCTCTTCTGTATGCAGTTGGGTTGGTGTCACTTGTGATGAGAGACACCATAGAGTCCACAGCTTGACTCTCCGAAACATGAGTCTTAGTGGTACAATTTCTCCAAAGTTGGGGAATCTGTCTTTCCTTGTTATACTTGACATCTCTCGTAATAACTTTAGTGGTCAGTTTCCCAAAGAGATATGTCGGTTGCGCCGATTAAAGTCTCTTGATTTAAACTATAACTGGTTTGTTGGAGGAATTCCTGAAGCGTTGGGGGACTTATCACGACTTCAATATTTGTATCTTGGTGTAAACAATTTTAGTGGTTTTATCCCCCAATCTATTGGTTATCTTCGTCAGTTGATATATTTTGAAATTGGTCACAACAAGATGTATGGACCCATACCTCAAACAATTTCAAACATGTCTTCACTTAAATATATTGGTTTATCTTCTAACTACTTTTCAGCTCATGCCAATGCCAAAAACATCTCCACAGATCAATCTGCTCTTCTCGCATTCAAATCCCTCATTACTTCAGACCCCAATGATATGTTAGCTAATAATTGGTCAACCTCCTCTTCTGTATGCAGTTGGGTTGGTGTCACTTGTGATGAGAGACACCATAGAGTCCACAGCTTGACTCTCCGAAACATGAGTCTTAGTGGTACAATTTCTCCAAAGTTGGGGAATCTGTCTTTCCTTGTTATACTTGACATCTCTCGTAATAACTTTAGTGGTCAGTTTCCCAAAGAGATATGTCGGTTGCGCCGATTAAAGTCTCTTGATTTAAACTATAACTGGTTTGTTGGAGGAATTCCTGAAGCGTTGGGGGACTTATCACGACTTCAATATTTGTATCTTGGTGTAAACAATTTTAGTGGTTTTATCCCCCAATCTATTGGTTATCTTCGTCAGTTGATATATTTTGAAATTGGTCACAACAAGATGTATGGACCCATACCTCAAACAATTTCAAACATGTCTTCACTTAAATATATTGGTTTATCTTCTAACTACTTTTCAGGAGAAATTTCAAAATGGATATCGGGTGATCTTACACAGCTGCAAGCATTGTACCTTCACAATAACCAGTTTTCAGGAAACGTATCGTCCATATTCAAATTCAACAGCTCAATATTGCAAGATTTGTATCTTAGGTATAATAATCTGTCTGGTAATCTTCCGTCAAATATTTGTCACAGACTTCCAAATCTTAGAATTTTTGATATTAGTGATAATGATCTTTCTGGTGACATACCGACTATTTGGCATCAATGCGAAGAGTTGTTGGGATTAGATCTTTCATTCAATAGTTTCAACAAAGGACCCATACCAGAAGGCATCATGAACATGGCCAAACTTCAAAATTTATTTCTTATTGGCAACAATTTGGAGGGTTCTATACCTGAGGAGATTGTCTATCTTGATAAACTTGAGCTTCTAATATTGTCTGTTAATAACTTAAGTGGAACTATTCATTCCAAAATCTTCAACATGTCATCGTTAACACATTTGGAGCTTGAACGAAATAGTCTCTCAGGCACAATCCCATCAAATACGGGATTCCTTCCTAACCTGCAAAAACTACACTTGAATCATAACAAATTTGTTGGAAATATTCCAAATAGTATTTTCAACTCTTCTAATCTCGTTGAATTTGAAGCGGTTGACAATGAATTTAGTGGAACTCTACCCAATAATGCTTTTCGGAATTTAAGGTTGCTCGATTCGTTTATCATAAGTTTCAACAATTTGACAATCGACGATCCTCTTCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAAATTCTAGACATATCGAGAAATCCTATATCATCAAATCTTCCTAAGTCAATTGGAAACATAACTTCAACTTATTTTGACATGGATTTATGTGGAATTGATGGTAGTATTCCCCTAGAAGTTGGAAACATGAGCAACTTGCTACAACTTTCTCTACCTGGGAATAATATAAATGGACCAATACCGGTCACATTAAAAGGATTACAAAAACTTCAGTATTTGGATCTTAGCAACAATGGACTACAAGGATCATTTATTAAAGAGCTTTGTGGAATTGAGAGGTTGAGTGAGTTATATCTACAAAATAATAAGCTATCTGGTGTTTTGTCACCATGTTTGGGAAATATGACTTTTCTTAGAAATTTGGACATAGGATCTAACAATTTTAACTCTAGGATTCCTTCGTCTCTTTGGAGTCTTACATATATCTTAAAGTTAAATTTGTCCTCTAATGGTTTCAGTGGTAATCTTCCACCTGAGATTGCAAATTTGAGAGCAATTACATTATTAGATCTATCTAGAAATCATATTTCAAGCAACATTCCTGAAACCATCAGTTCCTTAAAAACTTTGCAGAATCTCTCCTTAGCCGATAACAAACTGTATGGATCAATTCCCACATCACTTGATGAAATGGTAAGCTTGATCTCCTTGGACTTGTCTCAAAATATGCTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTACCTTCAAAACATCAACTTCTCATACAATAGATTGCAAGGAGAGATTCCTTATGGTGGAGCTTTCCAAAATTTGACAGCTCATTCTTTTATGCATAATTTAGCACTTTGCGGAAATCCCCGCCTCCAAGTACCACCTTGTGGTAAACAAGATCAGAAAATGTCAATGACAAAGAAGATAATACTCAAATTCATACTTCCCATAGTTGTGTCAGCCATTTTGGTTGTTGCATGCATCATATGTTTTAAACTCAGAAGAAAAAATGTTGAAAATACTTTTGAAAGGGGTTTATCAGCATTAGGAGCTCCAAGAAGAATATCATATTATGAACTTGTGGAAGCAACAAATGGATTCGAAGAGAGCAAATTACTTGGAAGGGGGAGCTTTGGTTCTGTGTATGAGGGGAAGCTTCCTAATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCAATCTGAGGCAAAATCAAAGAGTTTTGATGTAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTGGTTAAGATTATCAGCAGTTGTTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAATTGCTGTTTAAATTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCCGCATTGGAGTATCTCCATCATGGTTCTTCAATACCTGTGGTTCATTGCGATCTAAAGCCTTCTAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAGCTCATGGACGAAGGACATTCTAAAACTCATACACAAACTTTGGCAACTATCGGATACCTTGCACCAGAGTATGGATCTAAAGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACCAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGTTTGAAATCATGGATCAATGAATCATTGCCTAATTCAATTATGAAGGTCTTGGATTCAAATTTAGTCCAACAAATTGAGGAAGAAACTGATGATATATTGATTCATATGTCATCTATTTTTGGTTTAGCTTTGAATTGTTGCGAATATTCACCGGAAGCAAGAATTAATATGACAGATGTTATTGCGTCGCTAATAAAAATCAAGACTTCAGTGTTTAGGGTAAACATGGTGTAG 3849 0.3591 MHCFVAYLAHANAKNISTDQSALLAFKSLITSDPNDMLANNWSTSSSVCSWVGVTCDERHHRVHSLTLRNMSLSGTISPKLGNLSFLVILDISRNNFSGQFPKEICRLRRLKSLDLNYNWFVGGIPEALGDLSRLQYLYLGVNNFSGFIPQSIGYLRQLIYFEIGHNKMYGPIPQTISNMSSLKYIGLSSNYFSAHANAKNISTDQSALLAFKSLITSDPNDMLANNWSTSSSVCSWVGVTCDERHHRVHSLTLRNMSLSGTISPKLGNLSFLVILDISRNNFSGQFPKEICRLRRLKSLDLNYNWFVGGIPEALGDLSRLQYLYLGVNNFSGFIPQSIGYLRQLIYFEIGHNKMYGPIPQTISNMSSLKYIGLSSNYFSGEISKWISGDLTQLQALYLHNNQFSGNVSSIFKFNSSILQDLYLRYNNLSGNLPSNICHRLPNLRIFDISDNDLSGDIPTIWHQCEELLGLDLSFNSFNKGPIPEGIMNMAKLQNLFLIGNNLEGSIPEEIVYLDKLELLILSVNNLSGTIHSKIFNMSSLTHLELERNSLSGTIPSNTGFLPNLQKLHLNHNKFVGNIPNSIFNSSNLVEFEAVDNEFSGTLPNNAFRNLRLLDSFIISFNNLTIDDPLQFFTSLTNCRYLKILDISRNPISSNLPKSIGNITSTYFDMDLCGIDGSIPLEVGNMSNLLQLSLPGNNINGPIPVTLKGLQKLQYLDLSNNGLQGSFIKELCGIERLSELYLQNNKLSGVLSPCLGNMTFLRNLDIGSNNFNSRIPSSLWSLTYILKLNLSSNGFSGNLPPEIANLRAITLLDLSRNHISSNIPETISSLKTLQNLSLADNKLYGSIPTSLDEMVSLISLDLSQNMLTGVIPKSLESLLYLQNINFSYNRLQGEIPYGGAFQNLTAHSFMHNLALCGNPRLQVPPCGKQDQKMSMTKKIILKFILPIVVSAILVVACIICFKLRRKNVENTFERGLSALGAPRRISYYELVEATNGFEESKLLGRGSFGSVYEGKLPNGEMIAVKVIDLQSEAKSKSFDVECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYSNNCCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGHSKTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFVAELSLKSWINESLPNSIMKVLDSNLVQQIEEETDDILIHMSSIFGLALNCCEYSPEARINMTDVIASLIKIKTSVFRVNMV* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1876 1282 SUPERFAMILY Protein kinase-like (PK-like) 979 1269 IPR011009 -
Mtr1g1876 1282 ProSitePatterns Protein kinases ATP-binding region signature. 1003 1025 IPR017441 GO:0005524
Mtr1g1876 1282 Gene3D Ribonuclease Inhibitor 315 389 IPR032675 -
Mtr1g1876 1282 Gene3D Ribonuclease Inhibitor 391 666 IPR032675 -
Mtr1g1876 1282 Gene3D Phosphorylase Kinase; domain 1 980 1072 - -
Mtr1g1876 1282 SUPERFAMILY L domain-like 203 479 - -
Mtr1g1876 1282 SUPERFAMILY L domain-like 419 665 - -
Mtr1g1876 1282 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 480 1276 - -
Mtr1g1876 1282 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 119 196 - -
Mtr1g1876 1282 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 196 319 - -
Mtr1g1876 1282 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 302 409 - -
Mtr1g1876 1282 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 134 - -
Mtr1g1876 1282 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 414 485 - -
Mtr1g1876 1282 Pfam Leucine rich repeat N-terminal domain 204 243 IPR013210 -
Mtr1g1876 1282 Pfam Leucine rich repeat N-terminal domain 18 57 IPR013210 -
Mtr1g1876 1282 SMART LRR_typ_2 758 782 IPR003591 -
Mtr1g1876 1282 SMART LRR_typ_2 108 132 IPR003591 -
Mtr1g1876 1282 SMART LRR_typ_2 294 318 IPR003591 -
Mtr1g1876 1282 SMART LRR_typ_2 514 538 IPR003591 -
Mtr1g1876 1282 SMART LRR_typ_2 806 830 IPR003591 -
Mtr1g1876 1282 SMART LRR_typ_2 710 729 IPR003591 -
Mtr1g1876 1282 SMART LRR_typ_2 391 414 IPR003591 -
Mtr1g1876 1282 SMART LRR_typ_2 854 877 IPR003591 -
Mtr1g1876 1282 SMART LRR_typ_2 562 586 IPR003591 -
Mtr1g1876 1282 SMART LRR_typ_2 734 757 IPR003591 -
Mtr1g1876 1282 Gene3D Ribonuclease Inhibitor 808 926 IPR032675 -
Mtr1g1876 1282 Gene3D Transferase(Phosphotransferase) domain 1 1073 1279 - -
Mtr1g1876 1282 Pfam Leucine Rich Repeat 856 878 IPR001611 GO:0005515
Mtr1g1876 1282 ProSiteProfiles Protein kinase domain profile. 997 1277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1876 1282 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 119 196 - -
Mtr1g1876 1282 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 480 1276 - -
Mtr1g1876 1282 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 302 409 - -
Mtr1g1876 1282 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 2 134 - -
Mtr1g1876 1282 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 414 485 - -
Mtr1g1876 1282 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 196 319 - -
Mtr1g1876 1282 SMART serkin_6 997 1276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1876 1282 SUPERFAMILY L domain-like 666 919 - -
Mtr1g1876 1282 Gene3D Ribonuclease Inhibitor 16 203 IPR032675 -
Mtr1g1876 1282 Pfam Protein kinase domain 997 1266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1876 1282 Gene3D Ribonuclease Inhibitor 667 732 IPR032675 -
Mtr1g1876 1282 Gene3D Ribonuclease Inhibitor 733 805 IPR032675 -
Mtr1g1876 1282 Gene3D Ribonuclease Inhibitor 204 314 IPR032675 -
Mtr1g1876 1282 SUPERFAMILY L domain-like 17 196 - -
Mtr1g1876 1282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1116 1128 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1876 Mtr-Chr1 27761896 27774484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1876 204 800 Receptor kinase-like Gene Family AT3G47570 33.884 4.32e-73 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr1g1876 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1876 - K13420 mtr:MTR_8g465340 1489.55