Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1845 ATGGACAAAAAAATCATTGAAAGAGAAACTCATGACTTAATGAATGTTGAGTCATTCTCTCAACTTCCCTTCATCCGTCCTCCTCCTACTAACAAAGAGAAAGGCATCCGCCTCTTCGGTATCGAATTCGGTGGTGGCGCCACCGAAGACGAGTCCTCTGAGTCTCCGGAAACAACCAACAACAACAATAACATTAACTCGTTCGAGGTTGACAACAACAACAACAACAAAGACAACAACAATAACGAAAACAACAGAAGATTTGAATGTCATTACTGTTGTAGAAACTTTCCTACTTCACAAGCCTTAGGTGGTCATCAAAACGCACACAAAAGAGAACGTCAACACGCAAAACGACAACACCTTCAATCAACTATGGTACATGCTACTACTTTCTCTGATCCACATCTCTACCATCATCATCATCAACAACAGCATCCTCTTTATAGATTCACATCATCATCACCATCATCATTATCATCTTCACCTTCTTATCCAACATGGAACACAAACTCAACTAGGTTCTATAACCATCCAACAACTTCTTCTTACTCTCAACAACAACCTATCAATGGTAGTCCTTTAGCTTTTTGGCGTATCCCAAATGGCACAGTTCAGAGTAACCCTAGTTTCAACCATGAACGTCCTTTACCTTTGCTTGCTTCTGAGGAAAGATCAAATTTGTGGCATAGTGGACAAGGAGTACCTTCTTCTTCTTCTGCTTCGCATAATCGTTACGTTTATGACTCTAAACGTAACGACCATGTTAGTTTGGATCTTCATCTCTAA 789 0.4018 MDKKIIERETHDLMNVESFSQLPFIRPPPTNKEKGIRLFGIEFGGGATEDESSESPETTNNNNNINSFEVDNNNNNKDNNNNENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSTMVHATTFSDPHLYHHHHQQQHPLYRFTSSSPSSLSSSPSYPTWNTNSTRFYNHPTTSSYSQQQPINGSPLAFWRIPNGTVQSNPSFNHERPLPLLASEERSNLWHSGQGVPSSSSASHNRYVYDSKRNDHVSLDLHL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1845 262 MobiDBLite consensus disorder prediction 103 122 - -
Mtr1g1845 262 PANTHER ZINC FINGER PROTEIN GIS 1 262 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Mtr1g1845 262 MobiDBLite consensus disorder prediction 138 166 - -
Mtr1g1845 262 MobiDBLite consensus disorder prediction 147 166 - -
Mtr1g1845 262 MobiDBLite consensus disorder prediction 229 246 - -
Mtr1g1845 262 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Mtr1g1845 262 MobiDBLite consensus disorder prediction 44 82 - -
Mtr1g1845 262 MobiDBLite consensus disorder prediction 51 81 - -
Mtr1g1845 262 SUPERFAMILY beta-beta-alpha zinc fingers 84 116 IPR036236 -
Mtr1g1845 262 MobiDBLite consensus disorder prediction 229 248 - -
Mtr1g1845 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Mtr1g1845 262 PANTHER ZINC FINGER PROTEIN GIS 1 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1845 Mtr-Chr1 27336907 27338262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1845 1 262 C2H2 Transcription Factor Family AT3G58070 40.647 4.28e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1845 - - gmx:100806594 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1845 1 27336907 27338262 Mtr1g1845 1 27336907 27338262 ECH