Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1837 ATGTTGTGCTGTGGAGGTGCAGACGAGGATTTGACCACTTTAGCTGCAAATCATTACAGTTCAGCAGCTATAGGGGCTAACGCGTATGGTGGTGGTCGTGGTGGCGGAGGAGGCGGCGATAGAGGAGAGCCAAGGAGCAATATTATCAAGAGTGGTGGTCCGCAGAAAGCATTAGAAATTGAGACACCCGAAATTAAGTTGAGCGAGTTAAAGCGGTTAACAGATAACTTTGGTACAAAAGCACTTATTGGAGAAGGTTCCAATGGGAGGGTTTTCCACGCAAAGTTGAGTACTGGGGAGGAGGCTGCAATTAAGAAGCTGGATACCGGTTCTTCACCGGATCCTGACTCCGATTCCGATTTTGAAGCACAGTTAGCAATTGTTTCAAGACTGAAGAATGAACACTTTGTGGGGTTGATGGGATATTCTCTTGAGGCAAATAACAGAATTTTGGTTTACCAATATGCAAGTCTTGGTTCGTTGCACGACACATTGCACGGAAGAAAAGGAGTTCAGGGGGCTGAACCTGGTATAATTTTGAGTTGGAACCAAAGAGTAAAAGTTGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAGAAAGTTCAACCTTCAATAGTTCATAGAGATGTTAGATCCACCAATGTTTTGCTGTTCAATGATTATGAGGCTAAGATTGCAGATTTCAACTTGACAAATCAGTCTTCTGACTCGGCAGCTCGACTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCTATGACAGGGCAAATAAACCAAAAAAGTGATGTTTATAGTTTTGGAGTTGTCCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTGGACCATACAATGCCTAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCAAGACTAAGTGAAGACAAAGTGAAGCAATGTGTGGATCCTAAACTAAACAATGACTATCCCCCAAAAGCGATTGCTAAGTTGGCAGCAGTTGCAGCACTTTGTGTTCAGTATGAAGCTGATTTTAGGCCAAACATGACAATTGTTGTCAAAGCTCTCCAGCCACTTCTCAATTCGAAACCGGCTGGACCTGACTCTCGTGCTTGA 1119 0.4352 MLCCGGADEDLTTLAANHYSSAAIGANAYGGGRGGGGGGDRGEPRSNIIKSGGPQKALEIETPEIKLSELKRLTDNFGTKALIGEGSNGRVFHAKLSTGEEAAIKKLDTGSSPDPDSDSDFEAQLAIVSRLKNEHFVGLMGYSLEANNRILVYQYASLGSLHDTLHGRKGVQGAEPGIILSWNQRVKVAFGAAKGLEFLHEKVQPSIVHRDVRSTNVLLFNDYEAKIADFNLTNQSSDSAARLHSTRVLGTFGYHAPEYAMTGQINQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPDSRA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1837 372 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Mtr1g1837 372 PANTHER OS03G0226300 PROTEIN 1 371 - -
Mtr1g1837 372 SUPERFAMILY Protein kinase-like (PK-like) 59 357 IPR011009 -
Mtr1g1837 372 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672|GO:0006468
Mtr1g1837 372 Gene3D Phosphorylase Kinase; domain 1 46 155 - -
Mtr1g1837 372 Gene3D Transferase(Phosphotransferase) domain 1 157 367 - -
Mtr1g1837 372 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 371 - -
Mtr1g1837 372 SMART tyrkin_6 77 357 IPR020635 GO:0004713|GO:0006468
Mtr1g1837 372 ProSitePatterns Tyrosine protein kinases specific active-site signature. 207 219 IPR008266 GO:0004672|GO:0006468
Mtr1g1837 372 ProSiteProfiles Protein kinase domain profile. 77 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1837 372 MobiDBLite consensus disorder prediction 29 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1837 Mtr-Chr1 27202260 27206517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1837 69 371 Receptor kinase-like Gene Family AT4G02010 44.164 8.20e-81 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mtr1g1837 PK_Tyr_Ser-Thr 8.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1837 - - gmx:100786291 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1837 1 27202260 27206517 Mtr1g1837 1 27202260 27206517 ECH
Mtr7g2742 7 44075383 44078297 Mtr1g1837 1 27202260 27206517 PCT