Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1833 ATGGCTTTCAAAAACTTCACCTTTATGAAATTGTATGTTTCCTTTCTACTTTCAATCTTGTTCTTTGTATCATTGTGTGTAGCAAATAATGTTCCACCTGAAACCATTTGCAAGGGTACCATAAACCCTATTTATTGTAAAACCGTTCTTGGTAGTGAAAATGGAAACATATATGACTATGGTCGCATTTCTATTCGAAAGTCCTTATCCCAATCTCGTAAGTTTGTGAACTTATTGGACTCATATCTTCAAGGGAGTTCGTCTTTGTCTCAATCCACAATTCGCGCTCTTGAAGATTGTCAATACCTTGCTAACCTAAGTTTTGAATACTTATCAAACACTTATGGCACAACAAATCAATCTAGTAACGTTCTTCCAACTTCTCAAGCCGAAGATTTTGAGACTTTCCTCAGCGCCGTTTTGACTAACCAACAAACATGTTTGGATGGTCTAAACACTACAACTTCTGATCAAAGAGTGAAAAATGACTTGTCATTATCTCTCTCCGATGACATAAAGCTTCATAGTGTAACCCTAGCCTTGTTCTTGAAGGGTTGGATGCCTGCGAATAAAATAAGAACGTCATGGCCACAAAAAGGGAGACATTTGAATTTCAAAAATGGTAATTTACCATTGAAGATGTCAAATAAAGCACGCGCTATTTATGATTCAGCTAGACGCCATGGGAGAAAACTACTTCAAACCGATGAAGATAGTATTTTGGTAAGTGATATTGTTGTTGTTAGTCAAGATGGAAGTGGAAACTTCACCACTATCAATGATGCAATAGCTGCTGCACCAAATAACACAGTTGCAAGTGATGGTTACTTCCTCATTTTTATCACTGAAGGTGTGTATGAAGAGTATGTCTCTATTGACAAAAAGAAGAAATACTTGATGATGATTGGAGAAGGAATCAATCAAACAATTATCACAGGCAATCGCAATGTCGCTGATGGTTTCACAACATTCAATTCAGCCACCTTTGCTGTGGTTGCTCAAGGGTTCGTGGCAGTTAACATAACATTTCGCAACACCGCTGGAGCAGCAAAAAATCAAGCAGTTGCACTAAGAAGTGGAGCAGACATGTCCACATTTTACAGCTGCAGCTTTGAAGGGTATCAAGATACACTATATACACATTCTTTGAGGCAATTTTATAGAGAATGTGATATCTATGGAACAGTTGATTTCATATTCGGAAATGGTGCAGTTGTTTTGCAAAATTGTAACATTTATCCCCGTCTTCCTCTAAGTGGACAATTCAATCCTATAACAGCTCAAGGTCGAACCGACCCGAATCAAAACACTGGAATTTCTATACAAAATGCAACTATTAAACCAGCAGATGATTTGGCTCCTAACGTTGCAACTGTTAAAACATACCTAGGGAGACCATGGAAAGAATATTCAAGAACAGTTTATATGCAATCCTTTATGGATAGTTTCATAAACCCTTCTGGTTGGCGTGAATGGAATGGTGATTTTGCTTTGAGCACTTTATATTATGCAGAATATGATAATAGAGGAGCAGGTTCAAGCACTGCAAATAGAGTAACATGGCCTGGTTATCATGTTATTGGTGCCACTGATGCAGCAAATTTTACGGTCTCTAACTTTGTGAGTGGTGATGATTGGATTCCTCAAACTGGTGTCCCTTACATGAGTGGATTGGTATAG 1680 0.3798 MAFKNFTFMKLYVSFLLSILFFVSLCVANNVPPETICKGTINPIYCKTVLGSENGNIYDYGRISIRKSLSQSRKFVNLLDSYLQGSSSLSQSTIRALEDCQYLANLSFEYLSNTYGTTNQSSNVLPTSQAEDFETFLSAVLTNQQTCLDGLNTTTSDQRVKNDLSLSLSDDIKLHSVTLALFLKGWMPANKIRTSWPQKGRHLNFKNGNLPLKMSNKARAIYDSARRHGRKLLQTDEDSILVSDIVVVSQDGSGNFTTINDAIAAAPNNTVASDGYFLIFITEGVYEEYVSIDKKKKYLMMIGEGINQTIITGNRNVADGFTTFNSATFAVVAQGFVAVNITFRNTAGAAKNQAVALRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNGAVVLQNCNIYPRLPLSGQFNPITAQGRTDPNQNTGISIQNATIKPADDLAPNVATVKTYLGRPWKEYSRTVYMQSFMDSFINPSGWREWNGDFALSTLYYAEYDNRGAGSSTANRVTWPGYHVIGATDAANFTVSNFVSGDDWIPQTGVPYMSGLV* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1833 559 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Mtr1g1833 559 Pfam Plant invertase/pectin methylesterase inhibitor 34 162 IPR006501 GO:0004857
Mtr1g1833 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 182 IPR035513 -
Mtr1g1833 559 PANTHER PECTINESTERASE 14 557 - -
Mtr1g1833 559 Gene3D - 243 559 IPR012334 -
Mtr1g1833 559 SUPERFAMILY Pectin lyase-like 242 557 IPR011050 -
Mtr1g1833 559 CDD PMEI-like_3 35 186 - -
Mtr1g1833 559 Pfam Pectinesterase 246 544 IPR000070 GO:0030599|GO:0042545
Mtr1g1833 559 SMART PMEI_2 28 181 IPR006501 GO:0004857
Mtr1g1833 559 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 14 557 - -
Mtr1g1833 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 184 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1833 Mtr-Chr1 27112714 27114944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1833 8 559 Carbohydrate Esterase AT1G02810 60.381 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1833 K01051 - gmx:100813051 861.292