Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1827 ATGCTTTCTTCAACTATACAAGCTATCATTTTCTTTTCGTTAATCCTTCTTTATCCTTCAAATGGACAATTGAATGCAACTTTCTATTCTAACACATGCCCTAATGTGTCATCCATTGTGAAAAATGCTGTTCAACAAGCTCTACAATCTGATTCACGAATTGGTGCAAGCTTAATTCGTCTTCATTTTCATGATTGCTTTGTCAATGGGTGTGACGCGTCGATTTTGTTAGACCAAGGAGGAAACATTACACAAAGTGAGAAAAATGCAGCTCCAAATTTCAATTCCATTCGTGGATTCGGTGTGGTTGATACCATCAAAAGCTCTCTTGAAAGTTCATGCTCTGGCGTTGTATCTTGCGCTGATATTCTTGCCCTTGCAGCTGAATCTTCTGTGTCTTTGGCAGGGGGTCCTTCATGGAATGTACTACTTGGGAGAAGAGATGGTTTAACAGCAAATCAAGGTGGTGCGAATAGCTCCATTCCCTCTCCATTTGAGAGCCTAGCCAATGTTACATCTAAATTCTCTGCAGTTAACCTTGACACTACTGATATGGTTGCATTGTCAGGTGCTCACACATTTGGACGTGCTCAATGCCAATTTTTCTCCCAAAGACTGTTCAACTTCAATGGCACTGGAAACCCAGACCCAACCCTAAACACAACCTATTTAGCAACACTTCAACAAAATTGTCCCCAAAATGGAAACGGTTCTACTTTGAACAACTTAGACCCATCAACTCAAGACACATTCGACAACAACTACTTCACCAATCTTCTAACCAAAATGGGTCTTCTTCAAACAGATCAACACCTTTTTTCTACCAATGGTTCTTCCACTGTCTCAATTGTTAACACCTTTGCCAATAACCAAACAGCATTTTTTAACCAATTTGCTCAATCAATGATCAATATGGGTAATATTAGCCCCTTAACGGGTACTCAAGGAGAAATTAGAATTGATTGTAAGAAAGTCAATGGAAGTTGA 987 0.3951 MLSSTIQAIIFFSLILLYPSNGQLNATFYSNTCPNVSSIVKNAVQQALQSDSRIGASLIRLHFHDCFVNGCDASILLDQGGNITQSEKNAAPNFNSIRGFGVVDTIKSSLESSCSGVVSCADILALAAESSVSLAGGPSWNVLLGRRDGLTANQGGANSSIPSPFESLANVTSKFSAVNLDTTDMVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPTLNTTYLATLQQNCPQNGNGSTLNNLDPSTQDTFDNNYFTNLLTKMGLLQTDQHLFSTNGSSTVSIVNTFANNQTAFFNQFAQSMINMGNISPLTGTQGEIRIDCKKVNGS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1827 328 PANTHER PEROXIDASE 72-RELATED 8 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 ProSiteProfiles Plant heme peroxidase family profile. 23 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Mtr1g1827 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Mtr1g1827 328 SUPERFAMILY Heme-dependent peroxidases 23 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1827 328 CDD secretory_peroxidase 23 325 IPR033905 GO:0004601|GO:0042744
Mtr1g1827 328 PANTHER PEROXIDASE 8 327 - -
Mtr1g1827 328 Gene3D Peroxidase, domain 2 162 305 - -
Mtr1g1827 328 Gene3D - 28 326 - -
Mtr1g1827 328 Pfam Peroxidase 40 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1827 Mtr-Chr1 26955059 26957387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1827 5 328 Peroxidase AT5G06720 72.036 3.37e-171 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1827 K00430 - gmx:100811249 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1827 1 26955059 26957387 Mtr1g1827 1 26955059 26957387 ECH
Mtr7g2731 7 43971719 43973466 Mtr1g1827 1 26955059 26957387 PCT