Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1822 ATGAAATATCAATTATTATCAATCATATTCACTATCATAGCCTTAACCAAAGTTAATTCCTTTTATTTCAATTTCCCAACCTTCCAACAAAGTGATAGATCAACCAAGTTGTTACTAAGTAAATTCGCAAATATATACAAAGATGCTATCCAAGTAACCCCAGATAATCGCGGTGAAATAGAAAACTATTCTGGACGTGCTTTTTACATAAAGCCATACACACTTTGGAACAAAAACAAACTTTCTTCTTTTAACACCACTTTTGTTCTCAACATAAGTCCTCAAACATCGCCCGGAGGAGAAGGCATAGCTTTTATATTAGCTTCTGATACATCTCTCCCTGAAAACAGTGCTGGAGAATGGCTAGGTATTGTAAATGCTTCCACCAATGGAACTTCTCGTGCCGGAATTCTTGCTGTTGAGTTCGATACACGACAAAGTTCAACAAAAGACGGTCCTCACAACCATGTTGGAATCAACATAAATAGCATCGCGTCTATTGTACAAGCATCGTTGGATAACACTAAGGTTAATCTTTCATCTGGTATACATGTAACTGTGAGAATTCAATATTTCAATGATGTGATATCTGTTTTTGCTTCAATGGGTGACTATTTACTAGATTCTATGGAGACCATTTTGGTATCTCCACCTCTTAATCTATCTTCTTATCTTCGACAAGAGGTTTATGTTGGTTTCTCGGCTTCAACAAGCAATTACACGGAGTTAAACTGTGTAACAAGATGGGAATTCAATGGTGTTGATATTGGTAGTAAAGGAAAACTCTTGTGGATTATTTGGATTATAATTCCATTGGTGATACTTATAGGTGGATTCGTCTTTTTATTCCTTTATTGTCGAAGGAAAAGAAGCGATGAGGTTCAAGAAGATGCATATCCAAGGATAGAGGATCAAATTCAACACTCGTCTATGGCTCCAAAGAAATATCAGTTAAAGGAATTGGTCAAAGCAACAAATGGATTCAGCCATCAGAACAAACTCGGCCAAGGTGGATTTGGAACTGTCTATAAAGGAATCCTTGGAAACAATAAAGAGATAGCTGTGAAGAGAGTCTCGAAGGATTCTCGACAAGGAAAGCAAGAGTTTATAGCAGAAGTTACAACAATTGGTAGCCTTCACCACAAAAACTTGGTGAAACTCATTGGTTGGTGCTATGAGAAAAAAGAACTTCTCATTGTTTACGAGTTCATGCCTAATGGAAGCTTAGATAAGTACCTGTTTAACCAATCGAGGGAACTCGAATTACATTATTCGAAAGTACTTGATTGGAAAACTAGGAATGGCGTGATCCGTGATGTGGCTCAAGCATTGGATTATCTTCATGATGGTTGTGAAAAAAAGGTACTTCATAGAGACATTAAAGCAAGCAACATAATGTTGGATTTTGATTACGTTGCGAAATTAGGTGATTTTGGATTGGCGCGTACAATTCAAAAGAGAAATGAAACTCATCATTCGACAAAGGAAATTGCTGGAACACCAGGTTATATGGCACCAGAAACTTTTTTAACCGGAAGAGCAACGGTCGAAACAGATGTGTATGCATTTGGTGTACTTGTTTTGGAAGTTATTTGTGGAAAAAGACCAGGAAATGTGTATGCACAAGATGACTATAAAAATAGTATTGTGTATTGGGTTTGGGAGCTTTATGGAAATGGAAAAATTGTTAGTGTTGTGGATAAAAGGATAAGTGGTAAAGGGGATGATGAGGATGAGAGGGTAAAATTTGAGGAAGAAGTTGAAATTGTGCTTATTTTAGGGTTGGCTTGTTGTCATCCAAATCCAAATAAAAGGCCATCAATGAAAACTGTTTTGATGGTTCTTAATGGAGAAGCTTCTCCTCCAATGGTTCCGATTGAAAGACCGGCTTTTGTTTGGCCAGCCATGCCTTCATCTTTCAAAGAAGGTGAAGATAGTTCTCTTATCAATGGAACTCTCACTCCGTTCACTGAACTTAGTGGAAGATAG 1989 0.3731 MKYQLLSIIFTIIALTKVNSFYFNFPTFQQSDRSTKLLLSKFANIYKDAIQVTPDNRGEIENYSGRAFYIKPYTLWNKNKLSSFNTTFVLNISPQTSPGGEGIAFILASDTSLPENSAGEWLGIVNASTNGTSRAGILAVEFDTRQSSTKDGPHNHVGININSIASIVQASLDNTKVNLSSGIHVTVRIQYFNDVISVFASMGDYLLDSMETILVSPPLNLSSYLRQEVYVGFSASTSNYTELNCVTRWEFNGVDIGSKGKLLWIIWIIIPLVILIGGFVFLFLYCRRKRSDEVQEDAYPRIEDQIQHSSMAPKKYQLKELVKATNGFSHQNKLGQGGFGTVYKGILGNNKEIAVKRVSKDSRQGKQEFIAEVTTIGSLHHKNLVKLIGWCYEKKELLIVYEFMPNGSLDKYLFNQSRELELHYSKVLDWKTRNGVIRDVAQALDYLHDGCEKKVLHRDIKASNIMLDFDYVAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVICGKRPGNVYAQDDYKNSIVYWVWELYGNGKIVSVVDKRISGKGDDEDERVKFEEEVEIVLILGLACCHPNPNKRPSMKTVLMVLNGEASPPMVPIERPAFVWPAMPSSFKEGEDSSLINGTLTPFTELSGR* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1822 662 Gene3D - 18 258 - -
Mtr1g1822 662 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Mtr1g1822 662 Gene3D Phosphorylase Kinase; domain 1 289 403 - -
Mtr1g1822 662 PANTHER - 7 648 - -
Mtr1g1822 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 252 IPR013320 -
Mtr1g1822 662 CDD STKc_IRAK 334 617 - -
Mtr1g1822 662 SMART serkin_6 328 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1822 662 Pfam Legume lectin domain 23 253 IPR001220 GO:0030246
Mtr1g1822 662 Pfam Protein kinase domain 329 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1822 662 Gene3D Transferase(Phosphotransferase) domain 1 404 621 - -
Mtr1g1822 662 SUPERFAMILY Protein kinase-like (PK-like) 309 615 IPR011009 -
Mtr1g1822 662 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 7 648 - -
Mtr1g1822 662 CDD lectin_legume_LecRK_Arcelin_ConA 21 252 IPR001220 GO:0030246
Mtr1g1822 662 ProSiteProfiles Protein kinase domain profile. 328 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1822 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1822 Mtr-Chr1 26863519 26865975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1822 52 630 Receptor kinase-like Gene Family AT3G53810 38.989 4.79e-120 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr1g1822 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1822 - - gmx:100785031 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1822 1 26863519 26865975 Mtr1g1822 1 26863519 26865975 ECH