Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1819 TGCCACACAAATAACCCATTCACACTTTGGAACAAAAACAAAACAATAGCTTCCTTCAACACCACTTTTGTTCTCTACATAAGTCCTGAAACTTCACCTGGTGGAGAAGGCATAGCCTTTATCTTAACTTCAGATACAAATCTTCCTGAAAACAGTGATGGACAGTGGCTTGGTATTGTAAATGGTTCCACAGACGGAGATTCTCGGGCCCAAATTCTTGCAGTGGAGTTCGACACACGACAAAGTTCCACTTGGGATGGTCCTGACAACCATGTTGGAATCAACATAAATAGCATCTCTTCATTGACACAAGCATCATTGGAGAACACTAAAATCAATATTTCATCTGGTTTAGATGTAACTGTGAGAATTCAATATTCCAATGATATAATTCTGTTTTTTGGTTCAATGAGTAAAAACTCAAATGATTTTATGGAGACCCTTTTGGTATCTCCACCTCTTAATCTCTCTTCTTATCTTCAACAAGAGGTTTATGTCGGTTTCTCCGCTTCAACAAGCAATTACACGGAGTTAAACTGTGTAAAAAGATGGGAATTCAATGGTGTAGATATTGCAGATAGTAATAAAAATAATCTCTTGTTGATTTGGATTATAATTCCAACTGTGATTATCATAGGTGTGTTGTTACTTTTCTTGGTTTATCGGAAATTCCAAAGAAGAATGGAGGTTCAAGAAGATACATATCCAAGGATTGAGGATCAAATTCAACACTCATCTATGGCTCCAAAGAAATATCGACTAAAGGAATTGATGAATGCAACAGGTGGATTCAGCCATCAGAACAAGCTTGGTGAGGGTGGATTTGGAACCGTTTATAAGGGAATCCTTGGAAAAATCAATAAAGAGATAGCTGTGAAGAGAGTCTCAAAGAATTCGCGTCAAGGAAAGAAAGAATTTATCGCCGAAGTTACAACAATTGGAAGCCTTCACCACAAAAACTTGGTGAAACTCATTGGTTGGTGCTATGAAAGTAAAGAGCTTCTCCTTGTTTATGAGTTCATGCCAAATGGAAGTTTAGACAAATACCTATTTAACCAATCGAGTGAACTCGAATCACATTATTCGAAAGTACTTGATTGGAAAACTAGGAATGGTGTGATTCGTGACGTGGCGCAAGCATTGGATTATCTTCACAATGGTTGTGAAAAAAGGTTACTTCATAGAGACATTAAAACAAGCAACATAATGCTGGATTTTGATTACGTTGCAAAATTGGGTGATTTTGGATTGGCACGAATAGTTCAAATGAGAAAAGAAACTCATCATTCAACAAAGGAAATTGCAGGAACACCGGGCTATATGGCACCGGAAATATTTTTAACCGGAAGAGCGACGGTTGAAACAGATATTTATGCATTTGGTGTACTTGTTTTGGAAGTTGTGTGTGGAAAAAGACCAAGAAATATGTATGCACAAGATGATTATAAATATAGTATTGTGTATTGGGTTTGGGAGCTTTATGAAGAGGGAAAAAAAGTTAGTGCAGTTGATGATAGGATAAGTAGTGAAGAGGCTGAAACTGAAAAGGTTGAAATTGTGCTTATTCTTGGGTTGTCTTGTTGTCATCCAAATCCACATGAAAGACCAACAATGAAAACTGTTTTGATGGTTCTAAATGGAGAAGCTTCTCCTCCAATGGTTCCGATTGAAAGACCGGCTTTTGTTTGGAATGCTATGCCTTCATCTTTCAAACAAAATGAAAATGGTTCTCTTATCAGTGGAACTCTCACTCCATTCACTCAACTTAGTGGCAGATAG 1779 0.3732 CHTNNPFTLWNKNKTIASFNTTFVLYISPETSPGGEGIAFILTSDTNLPENSDGQWLGIVNGSTDGDSRAQILAVEFDTRQSSTWDGPDNHVGININSISSLTQASLENTKINISSGLDVTVRIQYSNDIILFFGSMSKNSNDFMETLLVSPPLNLSSYLQQEVYVGFSASTSNYTELNCVKRWEFNGVDIADSNKNNLLLIWIIIPTVIIIGVLLLFLVYRKFQRRMEVQEDTYPRIEDQIQHSSMAPKKYRLKELMNATGGFSHQNKLGEGGFGTVYKGILGKINKEIAVKRVSKNSRQGKKEFIAEVTTIGSLHHKNLVKLIGWCYESKELLLVYEFMPNGSLDKYLFNQSSELESHYSKVLDWKTRNGVIRDVAQALDYLHNGCEKRLLHRDIKTSNIMLDFDYVAKLGDFGLARIVQMRKETHHSTKEIAGTPGYMAPEIFLTGRATVETDIYAFGVLVLEVVCGKRPRNMYAQDDYKYSIVYWVWELYEEGKKVSAVDDRISSEEAETEKVEIVLILGLSCCHPNPHERPTMKTVLMVLNGEASPPMVPIERPAFVWNAMPSSFKQNENGSLISGTLTPFTQLSGR* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1819 592 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 4 576 - -
Mtr1g1819 592 Gene3D Transferase(Phosphotransferase) domain 1 341 551 - -
Mtr1g1819 592 SUPERFAMILY Protein kinase-like (PK-like) 246 545 IPR011009 -
Mtr1g1819 592 ProSitePatterns Legume lectins beta-chain signature. 73 79 IPR019825 -
Mtr1g1819 592 ProSitePatterns Protein kinases ATP-binding region signature. 270 293 IPR017441 GO:0005524
Mtr1g1819 592 Gene3D - 1 190 - -
Mtr1g1819 592 CDD lectin_legume_LecRK_Arcelin_ConA 4 187 IPR001220 GO:0030246
Mtr1g1819 592 Pfam Legume lectin domain 5 197 IPR001220 GO:0030246
Mtr1g1819 592 SUPERFAMILY Concanavalin A-like lectins/glucanases 3 187 IPR013320 -
Mtr1g1819 592 ProSiteProfiles Protein kinase domain profile. 264 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1819 592 SMART serkin_6 264 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1819 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Mtr1g1819 592 Gene3D Phosphorylase Kinase; domain 1 249 340 - -
Mtr1g1819 592 CDD STKc_IRAK 270 547 - -
Mtr1g1819 592 Pfam Protein kinase domain 265 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1819 592 PANTHER - 4 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1819 Mtr-Chr1 26855974 26857863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1819 11 560 Receptor kinase-like Gene Family AT3G53810 37.759 3.24e-119 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr1g1819 Pkinase 2.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1819 - - gmx:100785031 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1819 1 26855974 26857863 Mtr1g1819 1 26855974 26857863 ECH